Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.3■□□□□ 0.2
CLDN20P56880 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.3■□□□□ 0.2
CLDN20P56880 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CLDN20P56880 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN20P56880 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN20P56880 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN20P56880 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CLDN20P56880 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN20P56880 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN20P56880 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.3■□□□□ 0.2
CLDN20P56880 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN20P56880 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CLDN20P56880 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.29■□□□□ 0.2
CLDN20P56880 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.29■□□□□ 0.2
CLDN20P56880 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN20P56880 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CLDN20P56880 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN20P56880 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CLDN20P56880 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN20P56880 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CLDN20P56880 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN20P56880 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN20P56880 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.29■□□□□ 0.2
CLDN20P56880 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN20P56880 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN20P56880 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.29■□□□□ 0.2
CLDN20P56880 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN20P56880 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CLDN20P56880 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CLDN20P56880 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CLDN20P56880 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN20P56880 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN20P56880 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CLDN20P56880 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.29■□□□□ 0.2
CLDN20P56880 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN20P56880 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.29■□□□□ 0.2
CLDN20P56880 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.29■□□□□ 0.2
CLDN20P56880 MIR3180-1-201ENST00000580374 94 ntBASIC16.29■□□□□ 0.2
CLDN20P56880 AC090616.6-201ENST00000582640 721 ntBASIC16.29■□□□□ 0.2
CLDN20P56880 MIR3180-3-201ENST00000584616 94 ntBASIC16.29■□□□□ 0.2
CLDN20P56880 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.29■□□□□ 0.2
CLDN20P56880 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CLDN20P56880 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN20P56880 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.29■□□□□ 0.2
CLDN20P56880 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CLDN20P56880 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN20P56880 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.29■□□□□ 0.2
CLDN20P56880 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN20P56880 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.29■□□□□ 0.2
CLDN20P56880 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN20P56880 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.29■□□□□ 0.2
CLDN20P56880 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CLDN20P56880 BCL2-203ENST00000589955 5011 ntBASIC16.28■□□□□ 0.2
CLDN20P56880 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN20P56880 LINC00167-201ENST00000530583 1419 ntBASIC16.28■□□□□ 0.2
CLDN20P56880 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN20P56880 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CLDN20P56880 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN20P56880 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN20P56880 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN20P56880 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.28■□□□□ 0.2
CLDN20P56880 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN20P56880 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN20P56880 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN20P56880 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN20P56880 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CLDN20P56880 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN20P56880 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDN20P56880 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN20P56880 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN20P56880 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.28■□□□□ 0.2
CLDN20P56880 AD000864.1-201ENST00000624076 2295 ntBASIC16.28■□□□□ 0.2
CLDN20P56880 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN20P56880 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.28■□□□□ 0.2
CLDN20P56880 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN20P56880 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDN20P56880 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN20P56880 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN20P56880 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDN20P56880 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN20P56880 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDN20P56880 GUSBP12-201ENST00000513727 720 ntBASIC16.28■□□□□ 0.2
CLDN20P56880 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN20P56880 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CLDN20P56880 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.28■□□□□ 0.2
CLDN20P56880 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.28■□□□□ 0.2
CLDN20P56880 AC092329.2-201ENST00000598402 547 ntBASIC16.28■□□□□ 0.2
CLDN20P56880 AL592071.1-201ENST00000611956 408 ntBASIC16.28■□□□□ 0.2
CLDN20P56880 AC124864.1-201ENST00000623408 392 ntBASIC16.28■□□□□ 0.2
CLDN20P56880 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN20P56880 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN20P56880 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CLDN20P56880 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.28■□□□□ 0.2
CLDN20P56880 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN20P56880 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDN20P56880 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN20P56880 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.28■□□□□ 0.2
CLDN20P56880 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN20P56880 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN20P56880 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms