Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AL671883.3-201ENST00000603274 991 ntBASIC16.47■□□□□ 0.23
PER3P56645 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.47■□□□□ 0.23
PER3P56645 AC124864.1-201ENST00000623408 392 ntBASIC16.47■□□□□ 0.23
PER3P56645 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.47■□□□□ 0.23
PER3P56645 AC068587.9-201ENST00000641814 219 ntBASIC16.47■□□□□ 0.23
PER3P56645 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PER3P56645 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PER3P56645 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PER3P56645 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PER3P56645 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PER3P56645 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.47■□□□□ 0.23
PER3P56645 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
PER3P56645 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.47■□□□□ 0.23
PER3P56645 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PER3P56645 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PER3P56645 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PER3P56645 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PER3P56645 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PER3P56645 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PER3P56645 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PER3P56645 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.46■□□□□ 0.23
PER3P56645 NSUN5P1-202ENST00000421140 1535 ntBASIC16.46■□□□□ 0.23
PER3P56645 NSUN5P2-203ENST00000457352 1529 ntBASIC16.46■□□□□ 0.23
PER3P56645 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PER3P56645 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PER3P56645 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PER3P56645 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PER3P56645 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PER3P56645 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PER3P56645 POM121L3P-201ENST00000419331 1163 ntBASIC16.46■□□□□ 0.23
PER3P56645 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.46■□□□□ 0.23
PER3P56645 RNPS1P1-201ENST00000507437 918 ntBASIC16.46■□□□□ 0.23
PER3P56645 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.46■□□□□ 0.23
PER3P56645 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.46■□□□□ 0.23
PER3P56645 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
PER3P56645 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.46■□□□□ 0.23
PER3P56645 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.46■□□□□ 0.23
PER3P56645 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PER3P56645 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.46■□□□□ 0.23
PER3P56645 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.46■□□□□ 0.23
PER3P56645 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PER3P56645 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.46■□□□□ 0.23
PER3P56645 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
PER3P56645 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.46■□□□□ 0.23
PER3P56645 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PER3P56645 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PER3P56645 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PER3P56645 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PER3P56645 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.46■□□□□ 0.23
PER3P56645 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.46■□□□□ 0.23
PER3P56645 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.46■□□□□ 0.23
PER3P56645 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.46■□□□□ 0.23
PER3P56645 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.22
PER3P56645 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.46■□□□□ 0.22
PER3P56645 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.22
PER3P56645 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PER3P56645 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.22
PER3P56645 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.45■□□□□ 0.22
PER3P56645 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.45■□□□□ 0.22
PER3P56645 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PER3P56645 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PER3P56645 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.45■□□□□ 0.22
PER3P56645 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PER3P56645 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.45■□□□□ 0.22
PER3P56645 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.45■□□□□ 0.22
PER3P56645 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PER3P56645 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PER3P56645 AKR1C7P-201ENST00000305623 895 ntBASIC16.45■□□□□ 0.22
PER3P56645 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PER3P56645 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PER3P56645 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.45■□□□□ 0.22
PER3P56645 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PER3P56645 FAM197Y8-203ENST00000450145 560 ntBASIC16.45■□□□□ 0.22
PER3P56645 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.45■□□□□ 0.22
PER3P56645 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PER3P56645 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PER3P56645 AC011840.4-201ENST00000578471 627 ntBASIC16.45■□□□□ 0.22
PER3P56645 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.45■□□□□ 0.22
PER3P56645 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PER3P56645 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.45■□□□□ 0.22
PER3P56645 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PER3P56645 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PER3P56645 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PER3P56645 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
PER3P56645 HEIH-201ENST00000623091 1652 ntBASIC16.45■□□□□ 0.22
PER3P56645 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PER3P56645 Z98044.1-201ENST00000632503 1764 ntBASIC16.45■□□□□ 0.22
PER3P56645 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PER3P56645 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PER3P56645 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PER3P56645 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.45■□□□□ 0.22
PER3P56645 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PER3P56645 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PER3P56645 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PER3P56645 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
PER3P56645 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PER3P56645 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.45■□□□□ 0.22
PER3P56645 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.45■□□□□ 0.22
PER3P56645 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
PER3P56645 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms