Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXG1P55316 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
FOXG1P55316 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXG1P55316 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXG1P55316 FAM220CP-201ENST00000395253 831 ntBASIC15.56■□□□□ 0.08
FOXG1P55316 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
FOXG1P55316 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.56■□□□□ 0.08
FOXG1P55316 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXG1P55316 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.56■□□□□ 0.08
FOXG1P55316 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.56■□□□□ 0.08
FOXG1P55316 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
FOXG1P55316 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.56■□□□□ 0.08
FOXG1P55316 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.56■□□□□ 0.08
FOXG1P55316 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.56■□□□□ 0.08
FOXG1P55316 REXO1L6P-202ENST00000619970 1078 ntBASIC15.56■□□□□ 0.08
FOXG1P55316 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.56■□□□□ 0.08
FOXG1P55316 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXG1P55316 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXG1P55316 AC006116.8-202ENST00000587620 1550 ntBASIC15.56■□□□□ 0.08
FOXG1P55316 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.56■□□□□ 0.08
FOXG1P55316 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
FOXG1P55316 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXG1P55316 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
FOXG1P55316 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXG1P55316 REXO1L11P-201ENST00000620964 1927 ntBASIC15.56■□□□□ 0.08
FOXG1P55316 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.56■□□□□ 0.08
FOXG1P55316 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXG1P55316 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
FOXG1P55316 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXG1P55316 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
FOXG1P55316 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
FOXG1P55316 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXG1P55316 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXG1P55316 AC068880.1-201ENST00000507289 2297 ntBASIC15.55■□□□□ 0.08
FOXG1P55316 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
FOXG1P55316 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXG1P55316 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
FOXG1P55316 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.55■□□□□ 0.08
FOXG1P55316 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXG1P55316 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.55■□□□□ 0.08
FOXG1P55316 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXG1P55316 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXG1P55316 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
FOXG1P55316 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
FOXG1P55316 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
FOXG1P55316 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXG1P55316 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.55■□□□□ 0.08
FOXG1P55316 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.55■□□□□ 0.08
FOXG1P55316 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXG1P55316 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
FOXG1P55316 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.55■□□□□ 0.08
FOXG1P55316 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.55■□□□□ 0.08
FOXG1P55316 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXG1P55316 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXG1P55316 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
FOXG1P55316 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.55■□□□□ 0.08
FOXG1P55316 DDX43P3-201ENST00000441064 443 ntBASIC15.55■□□□□ 0.08
FOXG1P55316 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.55■□□□□ 0.08
FOXG1P55316 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.55■□□□□ 0.08
FOXG1P55316 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXG1P55316 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.55■□□□□ 0.08
FOXG1P55316 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
FOXG1P55316 AC116407.2-201ENST00000613639 860 ntBASIC15.55■□□□□ 0.08
FOXG1P55316 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXG1P55316 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC15.55■□□□□ 0.08
FOXG1P55316 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
FOXG1P55316 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
FOXG1P55316 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXG1P55316 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXG1P55316 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXG1P55316 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXG1P55316 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
FOXG1P55316 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
FOXG1P55316 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXG1P55316 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC15.55■□□□□ 0.08
FOXG1P55316 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXG1P55316 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC15.55■□□□□ 0.08
FOXG1P55316 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXG1P55316 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
FOXG1P55316 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
FOXG1P55316 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXG1P55316 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
FOXG1P55316 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
FOXG1P55316 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.54■□□□□ 0.08
FOXG1P55316 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
FOXG1P55316 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
FOXG1P55316 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXG1P55316 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
FOXG1P55316 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXG1P55316 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
FOXG1P55316 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
FOXG1P55316 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXG1P55316 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXG1P55316 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.54■□□□□ 0.08
FOXG1P55316 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.54■□□□□ 0.08
FOXG1P55316 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
FOXG1P55316 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.54■□□□□ 0.08
FOXG1P55316 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXG1P55316 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.54■□□□□ 0.08
FOXG1P55316 AL031008.1-201ENST00000619963 541 ntBASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms