Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PDE1AP54750 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PDE1AP54750 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDE1AP54750 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PDE1AP54750 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC21.67■■□□□ 1.06
PDE1AP54750 AC246785.2-201ENST00000432512 513 ntBASIC21.67■■□□□ 1.06
PDE1AP54750 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC21.67■■□□□ 1.06
PDE1AP54750 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC21.67■■□□□ 1.06
PDE1AP54750 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC21.67■■□□□ 1.06
PDE1AP54750 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.67■■□□□ 1.06
PDE1AP54750 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC21.67■■□□□ 1.06
PDE1AP54750 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC21.67■■□□□ 1.06
PDE1AP54750 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDE1AP54750 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC21.67■■□□□ 1.06
PDE1AP54750 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDE1AP54750 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDE1AP54750 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDE1AP54750 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDE1AP54750 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PDE1AP54750 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PDE1AP54750 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC21.66■■□□□ 1.06
PDE1AP54750 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDE1AP54750 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PDE1AP54750 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC21.66■■□□□ 1.06
PDE1AP54750 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PDE1AP54750 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDE1AP54750 PPIH-202ENST00000372549 327 ntTSL 3 BASIC21.66■■□□□ 1.06
PDE1AP54750 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
PDE1AP54750 MIR1224-201ENST00000408193 85 ntBASIC21.66■■□□□ 1.06
PDE1AP54750 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC21.66■■□□□ 1.06
PDE1AP54750 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PDE1AP54750 PON3-205ENST00000451904 1053 ntTSL 3 BASIC21.66■■□□□ 1.06
PDE1AP54750 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC21.66■■□□□ 1.06
PDE1AP54750 TPSP2-201ENST00000561760 610 ntBASIC21.66■■□□□ 1.06
PDE1AP54750 MPI-205ENST00000562606 1052 ntTSL 3 BASIC21.66■■□□□ 1.06
PDE1AP54750 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDE1AP54750 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDE1AP54750 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC21.66■■□□□ 1.06
PDE1AP54750 TPR-209ENST00000613151 2478 ntTSL 5 BASIC21.66■■□□□ 1.06
PDE1AP54750 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
PDE1AP54750 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDE1AP54750 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PDE1AP54750 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
PDE1AP54750 CROCCP2-202ENST00000412962 2773 ntBASIC21.65■■□□□ 1.06
PDE1AP54750 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC21.65■■□□□ 1.06
PDE1AP54750 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC21.65■■□□□ 1.06
PDE1AP54750 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDE1AP54750 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
PDE1AP54750 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PDE1AP54750 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC21.65■■□□□ 1.06
PDE1AP54750 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PDE1AP54750 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDE1AP54750 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDE1AP54750 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
PDE1AP54750 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDE1AP54750 DRAXINP1-201ENST00000437611 948 ntBASIC21.65■■□□□ 1.06
PDE1AP54750 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDE1AP54750 MEG3-211ENST00000452514 461 ntTSL 3 BASIC21.65■■□□□ 1.06
PDE1AP54750 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC21.65■■□□□ 1.06
PDE1AP54750 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC21.65■■□□□ 1.06
PDE1AP54750 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC21.65■■□□□ 1.06
PDE1AP54750 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
PDE1AP54750 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDE1AP54750 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC21.65■■□□□ 1.06
PDE1AP54750 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
PDE1AP54750 PC-208ENST00000529047 1607 ntTSL 3 BASIC21.65■■□□□ 1.06
PDE1AP54750 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDE1AP54750 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC21.65■■□□□ 1.06
PDE1AP54750 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
PDE1AP54750 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
PDE1AP54750 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDE1AP54750 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDE1AP54750 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC21.64■■□□□ 1.06
PDE1AP54750 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC21.64■■□□□ 1.06
PDE1AP54750 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
PDE1AP54750 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PDE1AP54750 AC233702.3-201ENST00000578656 1387 ntBASIC21.64■■□□□ 1.06
PDE1AP54750 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDE1AP54750 KRT18P1-202ENST00000452408 1331 ntBASIC21.64■■□□□ 1.05
PDE1AP54750 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PDE1AP54750 ARMC10P1-201ENST00000313754 855 ntBASIC21.64■■□□□ 1.05
PDE1AP54750 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDE1AP54750 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC21.64■■□□□ 1.05
PDE1AP54750 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC21.64■■□□□ 1.05
PDE1AP54750 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PDE1AP54750 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PDE1AP54750 MIR3180-1-201ENST00000580374 94 ntBASIC21.64■■□□□ 1.05
PDE1AP54750 MIR3180-3-201ENST00000584616 94 ntBASIC21.64■■□□□ 1.05
PDE1AP54750 AP002414.4-201ENST00000589764 1148 ntBASIC21.64■■□□□ 1.05
PDE1AP54750 NPAP1P7-201ENST00000613027 823 ntBASIC21.64■■□□□ 1.05
PDE1AP54750 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC21.64■■□□□ 1.05
PDE1AP54750 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
PDE1AP54750 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
PDE1AP54750 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDE1AP54750 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDE1AP54750 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDE1AP54750 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC21.64■■□□□ 1.05
PDE1AP54750 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PDE1AP54750 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDE1AP54750 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms