Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDX1P52945 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDX1P52945 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDX1P52945 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDX1P52945 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PDX1P52945 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDX1P52945 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PDX1P52945 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PDX1P52945 MIR940-201ENST00000401276 94 ntBASIC17.24■□□□□ 0.35
PDX1P52945 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.24■□□□□ 0.35
PDX1P52945 RPS2P1-201ENST00000434010 821 ntBASIC17.24■□□□□ 0.35
PDX1P52945 KRT18P65-201ENST00000439811 1286 ntBASIC17.24■□□□□ 0.35
PDX1P52945 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.24■□□□□ 0.35
PDX1P52945 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
PDX1P52945 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.24■□□□□ 0.35
PDX1P52945 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.24■□□□□ 0.35
PDX1P52945 PGAM5P1-201ENST00000518923 814 ntBASIC17.24■□□□□ 0.35
PDX1P52945 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.24■□□□□ 0.35
PDX1P52945 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.24■□□□□ 0.35
PDX1P52945 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDX1P52945 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.24■□□□□ 0.35
PDX1P52945 AC025062.2-201ENST00000605477 670 ntBASIC17.24■□□□□ 0.35
PDX1P52945 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.24■□□□□ 0.35
PDX1P52945 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PDX1P52945 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PDX1P52945 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.24■□□□□ 0.35
PDX1P52945 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.24■□□□□ 0.35
PDX1P52945 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.24■□□□□ 0.35
PDX1P52945 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDX1P52945 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDX1P52945 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDX1P52945 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDX1P52945 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDX1P52945 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.23■□□□□ 0.35
PDX1P52945 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDX1P52945 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDX1P52945 AC104109.2-201ENST00000602919 1418 ntBASIC17.23■□□□□ 0.35
PDX1P52945 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDX1P52945 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
PDX1P52945 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDX1P52945 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDX1P52945 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDX1P52945 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.23■□□□□ 0.35
PDX1P52945 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDX1P52945 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.23■□□□□ 0.35
PDX1P52945 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDX1P52945 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDX1P52945 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PDX1P52945 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.23■□□□□ 0.35
PDX1P52945 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.23■□□□□ 0.35
PDX1P52945 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.23■□□□□ 0.35
PDX1P52945 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.23■□□□□ 0.35
PDX1P52945 AC012640.2-201ENST00000561606 901 ntBASIC17.23■□□□□ 0.35
PDX1P52945 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.23■□□□□ 0.35
PDX1P52945 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.23■□□□□ 0.35
PDX1P52945 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDX1P52945 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PDX1P52945 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.23■□□□□ 0.35
PDX1P52945 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDX1P52945 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.23■□□□□ 0.35
PDX1P52945 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDX1P52945 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDX1P52945 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDX1P52945 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDX1P52945 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PDX1P52945 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.23■□□□□ 0.35
PDX1P52945 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDX1P52945 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
PDX1P52945 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDX1P52945 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDX1P52945 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDX1P52945 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
PDX1P52945 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDX1P52945 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.22■□□□□ 0.35
PDX1P52945 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PDX1P52945 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PDX1P52945 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDX1P52945 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDX1P52945 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDX1P52945 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PDX1P52945 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.22■□□□□ 0.35
PDX1P52945 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDX1P52945 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.22■□□□□ 0.35
PDX1P52945 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PDX1P52945 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.22■□□□□ 0.35
PDX1P52945 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.22■□□□□ 0.35
PDX1P52945 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.22■□□□□ 0.35
PDX1P52945 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.22■□□□□ 0.35
PDX1P52945 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.22■□□□□ 0.35
PDX1P52945 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDX1P52945 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDX1P52945 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PDX1P52945 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
PDX1P52945 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDX1P52945 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDX1P52945 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PDX1P52945 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PDX1P52945 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.22■□□□□ 0.35
PDX1P52945 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.22■□□□□ 0.35
PDX1P52945 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms