Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 HAUS4-221ENST00000557591 582 ntTSL 57.22□□□□□ -1.256e-8■□□□□ 10.7
NCBP2P52298 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.77■■□□□ 1.562e-7■□□□□ 10.7
NCBP2P52298 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC23.08■■□□□ 1.292e-7■□□□□ 10.7
NCBP2P52298 SAP130-205ENST00000450957 559 ntTSL 419.33■□□□□ 0.682e-7■□□□□ 10.7
NCBP2P52298 DHRSX-203ENST00000430536 490 ntTSL 218.97■□□□□ 0.632e-7■□□□□ 10.7
NCBP2P52298 DHRSX-202ENST00000412516 744 ntTSL 218.48■□□□□ 0.552e-7■□□□□ 10.7
NCBP2P52298 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.482e-7■□□□□ 10.7
NCBP2P52298 ZC3H18-212ENST00000569435 694 ntAPPRIS ALT2 TSL 515.49■□□□□ 0.072e-7■□□□□ 10.7
NCBP2P52298 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.012e-7■□□□□ 10.7
NCBP2P52298 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.88□□□□□ -0.032e-7■□□□□ 10.7
NCBP2P52298 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.062e-7■□□□□ 10.7
NCBP2P52298 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.112e-7■□□□□ 10.7
NCBP2P52298 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.162e-7■□□□□ 10.7
NCBP2P52298 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.172e-7■□□□□ 10.7
NCBP2P52298 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.312e-7■□□□□ 10.7
NCBP2P52298 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.322e-7■□□□□ 10.7
NCBP2P52298 ZBED1-204ENST00000461691 947 ntTSL 212.7□□□□□ -0.382e-7■□□□□ 10.7
NCBP2P52298 ZC3H18-202ENST00000452588 3211 ntTSL 2 BASIC12.2□□□□□ -0.462e-7■□□□□ 10.7
NCBP2P52298 CNOT10-205ENST00000435630 2290 ntTSL 1 (best)11.84□□□□□ -0.512e-7■□□□□ 10.7
NCBP2P52298 CNOT10-218ENST00000494439 551 ntTSL 510.28□□□□□ -0.762e-7■□□□□ 10.7
NCBP2P52298 CNOT10-219ENST00000556853 551 ntTSL 410.28□□□□□ -0.762e-7■□□□□ 10.7
NCBP2P52298 DHRSX-204ENST00000441131 539 ntTSL 26.93□□□□□ -1.32e-7■□□□□ 10.7
NCBP2P52298 FASN-208ENST00000635733 100 ntTSL 57.96□□□□□ -1.141e-10■□□□□ 10.7
NCBP2P52298 ARL6IP4-217ENST00000540382 1677 ntTSL 523.88■■□□□ 1.414e-10■□□□□ 10.7
NCBP2P52298 ARL6IP4-218ENST00000540708 1782 ntTSL 223.48■■□□□ 1.354e-10■□□□□ 10.7
NCBP2P52298 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.294e-10■□□□□ 10.7
NCBP2P52298 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC22.63■■□□□ 1.214e-10■□□□□ 10.7
NCBP2P52298 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.074e-10■□□□□ 10.7
NCBP2P52298 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.954e-10■□□□□ 10.7
NCBP2P52298 ARL6IP4-219ENST00000542099 1119 ntTSL 320.92■□□□□ 0.944e-10■□□□□ 10.7
NCBP2P52298 ARL6IP4-216ENST00000539770 1295 ntTSL 1 (best)20.49■□□□□ 0.874e-10■□□□□ 10.7
NCBP2P52298 ARL6IP4-209ENST00000442210 716 ntTSL 319.96■□□□□ 0.794e-10■□□□□ 10.7
NCBP2P52298 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.754e-10■□□□□ 10.7
NCBP2P52298 ARL6IP4-214ENST00000536502 1273 ntTSL 219.5■□□□□ 0.714e-10■□□□□ 10.7
NCBP2P52298 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.74e-10■□□□□ 10.7
NCBP2P52298 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.21■□□□□ 0.674e-10■□□□□ 10.7
NCBP2P52298 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.19■□□□□ 0.664e-10■□□□□ 10.7
NCBP2P52298 ARL6IP4-215ENST00000539576 1684 ntTSL 518.34■□□□□ 0.534e-10■□□□□ 10.7
NCBP2P52298 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.174e-10■□□□□ 10.7
NCBP2P52298 ARL6IP4-206ENST00000413381 799 ntAPPRIS ALT2 TSL 512.28□□□□□ -0.444e-10■□□□□ 10.7
NCBP2P52298 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.053e-13■□□□□ 10.7
NCBP2P52298 PLPP3-205ENST00000476206 597 ntTSL 214.26□□□□□ -0.133e-13■□□□□ 10.7
NCBP2P52298 PLPP3-203ENST00000461655 646 ntTSL 34.44□□□□□ -1.73e-13■□□□□ 10.7
NCBP2P52298 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.41■■□□□ 1.183e-7■□□□□ 10.7
NCBP2P52298 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.344e-6■□□□□ 10.7
NCBP2P52298 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.344e-6■□□□□ 10.7
NCBP2P52298 RNF220-202ENST00000355387 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.464e-6■□□□□ 10.7
NCBP2P52298 TJP2-205ENST00000423935 614 ntTSL 217.51■□□□□ 0.391e-9■□□□□ 10.7
NCBP2P52298 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.221e-9■□□□□ 10.7
NCBP2P52298 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.011e-9■□□□□ 10.7
NCBP2P52298 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC13.01□□□□□ -0.332e-18■□□□□ 10.7
NCBP2P52298 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.391e-9■□□□□ 10.7
NCBP2P52298 TJP2-211ENST00000636247 3725 ntTSL 1 (best)12.38□□□□□ -0.431e-9■□□□□ 10.7
NCBP2P52298 TJP2-201ENST00000348208 4058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.51e-9■□□□□ 10.7
NCBP2P52298 TJP2-210ENST00000606364 591 ntTSL 410.98□□□□□ -0.651e-9■□□□□ 10.7
NCBP2P52298 RPS16-201ENST00000251453 560 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.682e-18■□□□□ 10.7
NCBP2P52298 RPS16-206ENST00000601390 2389 ntTSL 210.5□□□□□ -0.732e-18■□□□□ 10.7
NCBP2P52298 TJP2-203ENST00000377259 588 ntTSL 39.13□□□□□ -0.951e-9■□□□□ 10.7
NCBP2P52298 RPS16-207ENST00000601655 492 ntTSL 1 (best) BASIC9.07□□□□□ -0.962e-18■□□□□ 10.7
NCBP2P52298 RPS16-204ENST00000599539 555 ntTSL 2 BASIC8.82□□□□□ -12e-18■□□□□ 10.7
NCBP2P52298 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.23e-8■□□□□ 10.7
NCBP2P52298 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.313e-8■□□□□ 10.7
NCBP2P52298 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.393e-8■□□□□ 10.7
NCBP2P52298 GOLGB1-205ENST00000482512 10295 ntTSL 1 (best)5.91□□□□□ -1.463e-8■□□□□ 10.7
NCBP2P52298 GOLGB1-208ENST00000494517 4959 ntAPPRIS ALT2 TSL 1 (best)5.06□□□□□ -1.63e-8■□□□□ 10.7
NCBP2P52298 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.992e-8■□□□□ 10.7
NCBP2P52298 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.3■□□□□ 0.682e-8■□□□□ 10.7
NCBP2P52298 NONO-203ENST00000373856 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.59e-7■□□□□ 10.7
NCBP2P52298 NONO-202ENST00000373841 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.629e-7■□□□□ 10.7
NCBP2P52298 NONO-201ENST00000276079 2713 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.899e-7■□□□□ 10.7
NCBP2P52298 NONO-215ENST00000535149 2882 ntTSL 2 BASIC9.05□□□□□ -0.969e-7■□□□□ 10.7
NCBP2P52298 NONO-212ENST00000474431 644 ntTSL 57.11□□□□□ -1.279e-7■□□□□ 10.7
NCBP2P52298 NONO-210ENST00000472185 397 ntTSL 55.84□□□□□ -1.479e-7■□□□□ 10.7
NCBP2P52298 DCAF5-204ENST00000553943 736 ntTSL 317.61■□□□□ 0.412e-7■□□□□ 10.7
NCBP2P52298 CDK5RAP1-214ENST00000488723 708 ntTSL 315.87■□□□□ 0.139e-8■□□□□ 10.7
NCBP2P52298 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.052e-7■□□□□ 10.7
NCBP2P52298 CDK5RAP1-208ENST00000471264 763 ntTSL 513.77□□□□□ -0.219e-8■□□□□ 10.7
NCBP2P52298 CDK5RAP1-211ENST00000477105 979 ntTSL 513.77□□□□□ -0.219e-8■□□□□ 10.7
NCBP2P52298 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.279e-8■□□□□ 10.7
NCBP2P52298 CDK5RAP1-205ENST00000460043 535 ntTSL 313.13□□□□□ -0.319e-8■□□□□ 10.7
NCBP2P52298 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.332e-7■□□□□ 10.7
NCBP2P52298 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC12.61□□□□□ -0.399e-8■□□□□ 10.7
NCBP2P52298 CDK5RAP1-215ENST00000496381 858 ntTSL 312.43□□□□□ -0.429e-8■□□□□ 10.7
NCBP2P52298 CDK5RAP1-201ENST00000339269 1891 ntTSL 1 (best) BASIC12.24□□□□□ -0.459e-8■□□□□ 10.7
NCBP2P52298 CDK5RAP1-206ENST00000461356 758 ntTSL 211.82□□□□□ -0.529e-8■□□□□ 10.7
NCBP2P52298 DCAF5-206ENST00000554681 759 ntTSL 211.17□□□□□ -0.622e-7■□□□□ 10.7
NCBP2P52298 CDK5RAP1-210ENST00000473997 1930 ntTSL 2 BASIC11.01□□□□□ -0.659e-8■□□□□ 10.7
NCBP2P52298 DCAF5-202ENST00000389997 2837 ntTSL 1 (best) BASIC10.73□□□□□ -0.692e-7■□□□□ 10.7
NCBP2P52298 DCAF5-207ENST00000556111 728 ntTSL 310.43□□□□□ -0.742e-7■□□□□ 10.7
NCBP2P52298 CDK5RAP1-212ENST00000481964 945 ntTSL 57.62□□□□□ -1.199e-8■□□□□ 10.7
NCBP2P52298 CDK5RAP1-213ENST00000482967 840 ntTSL 37.62□□□□□ -1.199e-8■□□□□ 10.7
NCBP2P52298 WDR26-203ENST00000445239 784 ntTSL 54.48□□□□□ -1.692e-9■□□□□ 10.7
NCBP2P52298 HDHD2-212ENST00000591671 557 ntTSL 217.75■□□□□ 0.433e-7■□□□□ 10.7
NCBP2P52298 HDHD2-205ENST00000588183 2224 ntTSL 1 (best)15.82■□□□□ 0.123e-7■□□□□ 10.7
NCBP2P52298 HDHD2-211ENST00000591480 569 ntTSL 415.54■□□□□ 0.083e-7■□□□□ 10.7
NCBP2P52298 HDHD2-213ENST00000592591 559 ntTSL 415.54■□□□□ 0.083e-7■□□□□ 10.7
NCBP2P52298 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.073e-7■□□□□ 10.7
NCBP2P52298 HDHD2-208ENST00000590481 569 ntTSL 415.16■□□□□ 0.023e-7■□□□□ 10.7
NCBP2P52298 HDHD2-203ENST00000587388 566 ntTSL 315.16■□□□□ 0.023e-7■□□□□ 10.7
NCBP2P52298 HDHD2-204ENST00000587841 788 ntTSL 314.8□□□□□ -0.043e-7■□□□□ 10.7
Retrieved 100 of 18,329 protein–RNA pairs in 252.9 ms