Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC14.06□□□□□ -0.16
CDC34P49427 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC14.06□□□□□ -0.16
CDC34P49427 AC011298.2-201ENST00000617989 482 ntBASIC14.06□□□□□ -0.16
CDC34P49427 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC14.06□□□□□ -0.16
CDC34P49427 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDC34P49427 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC14.06□□□□□ -0.16
CDC34P49427 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CDC34P49427 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CDC34P49427 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CDC34P49427 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.06□□□□□ -0.16
CDC34P49427 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDC34P49427 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
CDC34P49427 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDC34P49427 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CDC34P49427 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CDC34P49427 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDC34P49427 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDC34P49427 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CDC34P49427 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDC34P49427 PCDH8P1-201ENST00000428983 2773 ntBASIC14.05□□□□□ -0.16
CDC34P49427 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC34P49427 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
CDC34P49427 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC14.05□□□□□ -0.16
CDC34P49427 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC34P49427 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC34P49427 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC34P49427 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC34P49427 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC34P49427 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.05□□□□□ -0.16
CDC34P49427 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC34P49427 DOC2GP-204ENST00000639052 2548 ntBASIC14.05□□□□□ -0.16
CDC34P49427 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDC34P49427 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC34P49427 AGGF1P2-201ENST00000426656 2106 ntBASIC14.05□□□□□ -0.16
CDC34P49427 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC14.05□□□□□ -0.16
CDC34P49427 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC34P49427 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC34P49427 GPAT2P1-201ENST00000444924 1672 ntBASIC14.05□□□□□ -0.16
CDC34P49427 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
CDC34P49427 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
CDC34P49427 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC34P49427 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC14.05□□□□□ -0.16
CDC34P49427 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC14.05□□□□□ -0.16
CDC34P49427 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDC34P49427 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC14.05□□□□□ -0.16
CDC34P49427 FAM207BP-201ENST00000447172 505 ntBASIC14.05□□□□□ -0.16
CDC34P49427 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC14.05□□□□□ -0.16
CDC34P49427 DUTP2-201ENST00000519164 463 ntBASIC14.05□□□□□ -0.16
CDC34P49427 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC14.05□□□□□ -0.16
CDC34P49427 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC14.05□□□□□ -0.16
CDC34P49427 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC14.05□□□□□ -0.16
CDC34P49427 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC34P49427 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC14.05□□□□□ -0.16
CDC34P49427 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
CDC34P49427 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC34P49427 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC34P49427 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
CDC34P49427 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC34P49427 AC100803.2-201ENST00000562459 1963 ntBASIC14.05□□□□□ -0.16
CDC34P49427 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.05□□□□□ -0.16
CDC34P49427 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC34P49427 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.05□□□□□ -0.16
CDC34P49427 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC34P49427 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC34P49427 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CDC34P49427 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC34P49427 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
CDC34P49427 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC34P49427 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CDC34P49427 TBC1D3P2-202ENST00000577902 1649 ntBASIC14.04□□□□□ -0.16
CDC34P49427 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CDC34P49427 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.04□□□□□ -0.16
CDC34P49427 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CDC34P49427 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.04□□□□□ -0.16
CDC34P49427 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC14.04□□□□□ -0.16
CDC34P49427 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDC34P49427 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.04□□□□□ -0.16
CDC34P49427 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC34P49427 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC34P49427 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC34P49427 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
CDC34P49427 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC34P49427 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDC34P49427 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC34P49427 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC34P49427 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC34P49427 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
CDC34P49427 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CDC34P49427 PPP1R14BP5-201ENST00000440334 435 ntBASIC14.04□□□□□ -0.16
CDC34P49427 TSPY6P-201ENST00000448518 926 ntBASIC14.04□□□□□ -0.16
CDC34P49427 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CDC34P49427 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
CDC34P49427 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC14.04□□□□□ -0.16
CDC34P49427 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CDC34P49427 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC14.04□□□□□ -0.16
CDC34P49427 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDC34P49427 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC14.04□□□□□ -0.16
CDC34P49427 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC14.04□□□□□ -0.16
CDC34P49427 ANKRD20A6P-201ENST00000618763 204 ntBASIC14.04□□□□□ -0.16
CDC34P49427 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms