Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.12■□□□□ 0.33
SLC6A12P48065 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.12■□□□□ 0.33
SLC6A12P48065 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC6A12P48065 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC6A12P48065 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SLC6A12P48065 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC6A12P48065 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC6A12P48065 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC6A12P48065 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC6A12P48065 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC6A12P48065 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SLC6A12P48065 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC6A12P48065 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC6A12P48065 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.12■□□□□ 0.33
SLC6A12P48065 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC6A12P48065 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
SLC6A12P48065 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC6A12P48065 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC6A12P48065 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC6A12P48065 CROCCP2-202ENST00000412962 2773 ntBASIC17.11■□□□□ 0.33
SLC6A12P48065 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SLC6A12P48065 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A12P48065 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC6A12P48065 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A12P48065 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A12P48065 AL023806.1-201ENST00000603994 1649 ntBASIC17.11■□□□□ 0.33
SLC6A12P48065 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A12P48065 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC6A12P48065 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SLC6A12P48065 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A12P48065 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A12P48065 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A12P48065 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SLC6A12P48065 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A12P48065 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SLC6A12P48065 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A12P48065 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A12P48065 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A12P48065 TSSC2-201ENST00000450217 709 ntBASIC17.11■□□□□ 0.33
SLC6A12P48065 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC6A12P48065 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.11■□□□□ 0.33
SLC6A12P48065 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC6A12P48065 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.11■□□□□ 0.33
SLC6A12P48065 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC6A12P48065 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A12P48065 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.11■□□□□ 0.33
SLC6A12P48065 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A12P48065 AP005901.3-202ENST00000581653 237 ntBASIC17.11■□□□□ 0.33
SLC6A12P48065 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC6A12P48065 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.11■□□□□ 0.33
SLC6A12P48065 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC6A12P48065 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A12P48065 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A12P48065 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A12P48065 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC6A12P48065 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC6A12P48065 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A12P48065 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A12P48065 LYSMD4-203ENST00000378904 2122 ntBASIC17.11■□□□□ 0.33
SLC6A12P48065 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC6A12P48065 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.11■□□□□ 0.33
SLC6A12P48065 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC6A12P48065 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC6A12P48065 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A12P48065 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC6A12P48065 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC6A12P48065 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC6A12P48065 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC6A12P48065 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SLC6A12P48065 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SLC6A12P48065 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SLC6A12P48065 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC6A12P48065 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC6A12P48065 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC6A12P48065 AP002383.4-201ENST00000442518 975 ntBASIC17.1■□□□□ 0.33
SLC6A12P48065 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.1■□□□□ 0.33
SLC6A12P48065 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.1■□□□□ 0.33
SLC6A12P48065 KRT18P35-201ENST00000510488 1269 ntBASIC17.1■□□□□ 0.33
SLC6A12P48065 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.1■□□□□ 0.33
SLC6A12P48065 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SLC6A12P48065 AC019129.2-201ENST00000609837 1235 ntBASIC17.1■□□□□ 0.33
SLC6A12P48065 AP000550.4-202ENST00000639755 178 ntBASIC17.1■□□□□ 0.33
SLC6A12P48065 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SLC6A12P48065 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC6A12P48065 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC6A12P48065 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC6A12P48065 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.1■□□□□ 0.33
SLC6A12P48065 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SLC6A12P48065 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SLC6A12P48065 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC6A12P48065 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC6A12P48065 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SLC6A12P48065 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC6A12P48065 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC6A12P48065 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC6A12P48065 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC6A12P48065 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC6A12P48065 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC6A12P48065 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
SLC6A12P48065 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms