Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDE6BP35913 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC21.75■■□□□ 1.07
PDE6BP35913 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC21.75■■□□□ 1.07
PDE6BP35913 IGHV3-52-201ENST00000519770 353 ntBASIC21.75■■□□□ 1.07
PDE6BP35913 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PDE6BP35913 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC21.75■■□□□ 1.07
PDE6BP35913 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC21.75■■□□□ 1.07
PDE6BP35913 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PDE6BP35913 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDE6BP35913 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC21.75■■□□□ 1.07
PDE6BP35913 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC21.75■■□□□ 1.07
PDE6BP35913 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDE6BP35913 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDE6BP35913 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDE6BP35913 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PDE6BP35913 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC21.74■■□□□ 1.07
PDE6BP35913 AC126763.1-201ENST00000552015 2118 ntBASIC21.74■■□□□ 1.07
PDE6BP35913 AC009336.1-201ENST00000608941 1553 ntBASIC21.74■■□□□ 1.07
PDE6BP35913 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.74■■□□□ 1.07
PDE6BP35913 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
PDE6BP35913 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDE6BP35913 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PDE6BP35913 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PDE6BP35913 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PDE6BP35913 PTMS-202ENST00000389462 773 ntTSL 2 BASIC21.74■■□□□ 1.07
PDE6BP35913 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PDE6BP35913 CXCL1P1-201ENST00000502804 216 ntBASIC21.74■■□□□ 1.07
PDE6BP35913 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PDE6BP35913 DAD1-205ENST00000543337 501 ntTSL 3 BASIC21.74■■□□□ 1.07
PDE6BP35913 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC21.74■■□□□ 1.07
PDE6BP35913 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC21.74■■□□□ 1.07
PDE6BP35913 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC21.74■■□□□ 1.07
PDE6BP35913 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC21.74■■□□□ 1.07
PDE6BP35913 AC068137.2-201ENST00000605408 478 ntBASIC21.74■■□□□ 1.07
PDE6BP35913 REXO1L3P-201ENST00000622202 1288 ntBASIC21.74■■□□□ 1.07
PDE6BP35913 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PDE6BP35913 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC21.74■■□□□ 1.07
PDE6BP35913 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PDE6BP35913 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDE6BP35913 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC21.73■■□□□ 1.07
PDE6BP35913 AL121761.2-201ENST00000598007 1648 ntBASIC21.73■■□□□ 1.07
PDE6BP35913 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC21.73■■□□□ 1.07
PDE6BP35913 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PDE6BP35913 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
PDE6BP35913 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
PDE6BP35913 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC21.73■■□□□ 1.07
PDE6BP35913 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PDE6BP35913 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21.73■■□□□ 1.07
PDE6BP35913 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
PDE6BP35913 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDE6BP35913 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDE6BP35913 AC092474.2-201ENST00000424288 719 ntBASIC21.73■■□□□ 1.07
PDE6BP35913 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDE6BP35913 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
PDE6BP35913 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PDE6BP35913 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PDE6BP35913 GREM1-201ENST00000560677 623 ntTSL 4 BASIC21.73■■□□□ 1.07
PDE6BP35913 AC116407.2-201ENST00000613639 860 ntBASIC21.73■■□□□ 1.07
PDE6BP35913 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
PDE6BP35913 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDE6BP35913 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
PDE6BP35913 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDE6BP35913 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PDE6BP35913 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDE6BP35913 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PDE6BP35913 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PDE6BP35913 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PDE6BP35913 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC21.72■■□□□ 1.07
PDE6BP35913 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PDE6BP35913 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
PDE6BP35913 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDE6BP35913 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC21.72■■□□□ 1.07
PDE6BP35913 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDE6BP35913 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDE6BP35913 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDE6BP35913 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PDE6BP35913 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC21.72■■□□□ 1.07
PDE6BP35913 AC244107.1-201ENST00000442033 332 ntBASIC21.72■■□□□ 1.07
PDE6BP35913 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC21.72■■□□□ 1.07
PDE6BP35913 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PDE6BP35913 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
PDE6BP35913 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC21.72■■□□□ 1.07
PDE6BP35913 MED16-214ENST00000617672 554 ntTSL 5 BASIC21.72■■□□□ 1.07
PDE6BP35913 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC21.72■■□□□ 1.07
PDE6BP35913 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC21.72■■□□□ 1.07
PDE6BP35913 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDE6BP35913 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
PDE6BP35913 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PDE6BP35913 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PDE6BP35913 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDE6BP35913 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDE6BP35913 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PDE6BP35913 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDE6BP35913 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC21.72■■□□□ 1.07
PDE6BP35913 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDE6BP35913 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PDE6BP35913 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
PDE6BP35913 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDE6BP35913 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
PDE6BP35913 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms