Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
USP6P35125 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
USP6P35125 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC23.8■■□□□ 1.4
USP6P35125 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
USP6P35125 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
USP6P35125 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC23.8■■□□□ 1.4
USP6P35125 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
USP6P35125 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC23.8■■□□□ 1.4
USP6P35125 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC23.8■■□□□ 1.4
USP6P35125 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC23.8■■□□□ 1.4
USP6P35125 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC23.8■■□□□ 1.4
USP6P35125 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
USP6P35125 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
USP6P35125 BCAR1-209ENST00000546196 1340 ntBASIC23.8■■□□□ 1.4
USP6P35125 AL590787.1-201ENST00000568856 1315 ntBASIC23.8■■□□□ 1.4
USP6P35125 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC23.8■■□□□ 1.4
USP6P35125 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC23.79■■□□□ 1.4
USP6P35125 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC23.79■■□□□ 1.4
USP6P35125 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
USP6P35125 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
USP6P35125 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC23.79■■□□□ 1.4
USP6P35125 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC23.79■■□□□ 1.4
USP6P35125 SNHG9-202ENST00000564014 471 ntBASIC23.79■■□□□ 1.4
USP6P35125 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC23.79■■□□□ 1.4
USP6P35125 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
USP6P35125 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
USP6P35125 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC23.79■■□□□ 1.4
USP6P35125 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
USP6P35125 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
USP6P35125 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
USP6P35125 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
USP6P35125 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC23.78■■□□□ 1.4
USP6P35125 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
USP6P35125 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
USP6P35125 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
USP6P35125 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
USP6P35125 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
USP6P35125 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
USP6P35125 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
USP6P35125 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
USP6P35125 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC23.78■■□□□ 1.4
USP6P35125 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC23.78■■□□□ 1.4
USP6P35125 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC23.78■■□□□ 1.4
USP6P35125 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC23.78■■□□□ 1.4
USP6P35125 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC23.78■■□□□ 1.4
USP6P35125 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC23.78■■□□□ 1.4
USP6P35125 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
USP6P35125 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
USP6P35125 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC23.78■■□□□ 1.4
USP6P35125 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
USP6P35125 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
USP6P35125 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC23.78■■□□□ 1.4
USP6P35125 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
USP6P35125 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC23.78■■□□□ 1.4
USP6P35125 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
USP6P35125 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
USP6P35125 KRT18P55-202ENST00000578578 1546 ntBASIC23.77■■□□□ 1.4
USP6P35125 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
USP6P35125 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
USP6P35125 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC23.77■■□□□ 1.4
USP6P35125 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
USP6P35125 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
USP6P35125 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
USP6P35125 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC23.77■■□□□ 1.4
USP6P35125 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC23.77■■□□□ 1.4
USP6P35125 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
USP6P35125 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC23.77■■□□□ 1.4
USP6P35125 CITED2-204ENST00000618718 901 ntTSL 2 BASIC23.77■■□□□ 1.4
USP6P35125 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
USP6P35125 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
USP6P35125 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC23.77■■□□□ 1.4
USP6P35125 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
USP6P35125 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
USP6P35125 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
USP6P35125 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
USP6P35125 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
USP6P35125 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
USP6P35125 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC23.76■■□□□ 1.39
USP6P35125 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC23.76■■□□□ 1.39
USP6P35125 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
USP6P35125 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC23.76■■□□□ 1.39
USP6P35125 BX323043.1-201ENST00000641006 1765 ntBASIC23.76■■□□□ 1.39
USP6P35125 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
USP6P35125 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC23.76■■□□□ 1.39
USP6P35125 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
USP6P35125 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
USP6P35125 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
USP6P35125 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
USP6P35125 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC23.76■■□□□ 1.39
USP6P35125 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
USP6P35125 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC23.76■■□□□ 1.39
USP6P35125 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
USP6P35125 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
USP6P35125 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
USP6P35125 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
USP6P35125 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
USP6P35125 CEND1P1-201ENST00000451006 455 ntBASIC23.76■■□□□ 1.39
USP6P35125 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
USP6P35125 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC23.76■■□□□ 1.39
USP6P35125 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms