Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HOXC8P31273 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
HOXC8P31273 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXC8P31273 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
HOXC8P31273 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HOXC8P31273 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXC8P31273 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
HOXC8P31273 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HOXC8P31273 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HOXC8P31273 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.25■□□□□ 0.67
HOXC8P31273 PDPK2P-202ENST00000562415 1191 ntBASIC19.25■□□□□ 0.67
HOXC8P31273 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
HOXC8P31273 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.25■□□□□ 0.67
HOXC8P31273 MIR4469-201ENST00000583919 79 ntBASIC19.25■□□□□ 0.67
HOXC8P31273 GGTLC5P-201ENST00000617623 998 ntBASIC19.25■□□□□ 0.67
HOXC8P31273 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
HOXC8P31273 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.25■□□□□ 0.67
HOXC8P31273 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.25■□□□□ 0.67
HOXC8P31273 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXC8P31273 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXC8P31273 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXC8P31273 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.25■□□□□ 0.67
HOXC8P31273 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
HOXC8P31273 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXC8P31273 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.24■□□□□ 0.67
HOXC8P31273 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.24■□□□□ 0.67
HOXC8P31273 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
HOXC8P31273 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.24■□□□□ 0.67
HOXC8P31273 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HOXC8P31273 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXC8P31273 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.24■□□□□ 0.67
HOXC8P31273 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXC8P31273 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.24■□□□□ 0.67
HOXC8P31273 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HOXC8P31273 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXC8P31273 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
HOXC8P31273 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
HOXC8P31273 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HOXC8P31273 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
HOXC8P31273 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXC8P31273 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXC8P31273 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HOXC8P31273 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC19.24■□□□□ 0.67
HOXC8P31273 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.24■□□□□ 0.67
HOXC8P31273 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
HOXC8P31273 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.24■□□□□ 0.67
HOXC8P31273 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.24■□□□□ 0.67
HOXC8P31273 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HOXC8P31273 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
HOXC8P31273 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXC8P31273 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXC8P31273 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXC8P31273 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXC8P31273 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXC8P31273 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXC8P31273 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
HOXC8P31273 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXC8P31273 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.24■□□□□ 0.67
HOXC8P31273 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.24■□□□□ 0.67
HOXC8P31273 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXC8P31273 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXC8P31273 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXC8P31273 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
HOXC8P31273 HTR5BP-201ENST00000430851 1154 ntBASIC19.23■□□□□ 0.67
HOXC8P31273 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.23■□□□□ 0.67
HOXC8P31273 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
HOXC8P31273 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXC8P31273 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HOXC8P31273 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXC8P31273 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXC8P31273 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXC8P31273 AL590787.1-201ENST00000568856 1315 ntBASIC19.23■□□□□ 0.67
HOXC8P31273 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC8P31273 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC8P31273 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.22■□□□□ 0.67
HOXC8P31273 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC8P31273 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC8P31273 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC8P31273 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC8P31273 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.22■□□□□ 0.67
HOXC8P31273 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.22■□□□□ 0.67
HOXC8P31273 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.22■□□□□ 0.67
HOXC8P31273 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC8P31273 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC8P31273 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC8P31273 AC254562.1-201ENST00000417586 456 ntBASIC19.22■□□□□ 0.67
HOXC8P31273 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.22■□□□□ 0.67
HOXC8P31273 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.22■□□□□ 0.67
HOXC8P31273 HMGN1P19-201ENST00000436976 333 ntBASIC19.22■□□□□ 0.67
HOXC8P31273 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.22■□□□□ 0.67
HOXC8P31273 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.22■□□□□ 0.67
HOXC8P31273 AC027796.2-201ENST00000575326 344 ntBASIC19.22■□□□□ 0.67
HOXC8P31273 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
HOXC8P31273 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.22■□□□□ 0.67
HOXC8P31273 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.22■□□□□ 0.67
HOXC8P31273 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.22■□□□□ 0.67
HOXC8P31273 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.22■□□□□ 0.67
HOXC8P31273 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.22■□□□□ 0.67
HOXC8P31273 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC8P31273 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms