Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
HOXA6P31267 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXA6P31267 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXA6P31267 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXA6P31267 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HOXA6P31267 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
HOXA6P31267 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.41■□□□□ 0.38
HOXA6P31267 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXA6P31267 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXA6P31267 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXA6P31267 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HOXA6P31267 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
HOXA6P31267 ADH5P3-201ENST00000433842 1137 ntBASIC17.41■□□□□ 0.38
HOXA6P31267 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HOXA6P31267 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
HOXA6P31267 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.41■□□□□ 0.38
HOXA6P31267 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.41■□□□□ 0.38
HOXA6P31267 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.41■□□□□ 0.38
HOXA6P31267 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXA6P31267 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.41■□□□□ 0.38
HOXA6P31267 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.41■□□□□ 0.38
HOXA6P31267 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.41■□□□□ 0.38
HOXA6P31267 AC009093.7-201ENST00000623853 1223 ntBASIC17.41■□□□□ 0.38
HOXA6P31267 Z92544.3-201ENST00000624747 417 ntBASIC17.41■□□□□ 0.38
HOXA6P31267 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.41■□□□□ 0.38
HOXA6P31267 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXA6P31267 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXA6P31267 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.41■□□□□ 0.38
HOXA6P31267 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXA6P31267 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXA6P31267 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXA6P31267 PI4KAP1-204ENST00000612579 1703 ntBASIC17.41■□□□□ 0.38
HOXA6P31267 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HOXA6P31267 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA6P31267 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HOXA6P31267 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA6P31267 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.4■□□□□ 0.38
HOXA6P31267 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA6P31267 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA6P31267 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA6P31267 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.4■□□□□ 0.38
HOXA6P31267 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.4■□□□□ 0.38
HOXA6P31267 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.4■□□□□ 0.38
HOXA6P31267 FAM86C2P-203ENST00000528684 1004 ntBASIC17.4■□□□□ 0.38
HOXA6P31267 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
HOXA6P31267 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.4■□□□□ 0.38
HOXA6P31267 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.4■□□□□ 0.38
HOXA6P31267 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.4■□□□□ 0.38
HOXA6P31267 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.4■□□□□ 0.38
HOXA6P31267 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.4■□□□□ 0.38
HOXA6P31267 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.4■□□□□ 0.38
HOXA6P31267 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.4■□□□□ 0.38
HOXA6P31267 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.4■□□□□ 0.38
HOXA6P31267 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA6P31267 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.4■□□□□ 0.38
HOXA6P31267 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA6P31267 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA6P31267 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA6P31267 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA6P31267 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
HOXA6P31267 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
HOXA6P31267 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA6P31267 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA6P31267 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA6P31267 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.39■□□□□ 0.37
HOXA6P31267 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA6P31267 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA6P31267 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
HOXA6P31267 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA6P31267 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA6P31267 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA6P31267 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.39■□□□□ 0.37
HOXA6P31267 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
HOXA6P31267 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA6P31267 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA6P31267 AC002056.1-201ENST00000395613 760 ntBASIC17.39■□□□□ 0.37
HOXA6P31267 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.39■□□□□ 0.37
HOXA6P31267 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
HOXA6P31267 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.39■□□□□ 0.37
HOXA6P31267 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.39■□□□□ 0.37
HOXA6P31267 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA6P31267 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
HOXA6P31267 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.39■□□□□ 0.37
HOXA6P31267 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
HOXA6P31267 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.39■□□□□ 0.37
HOXA6P31267 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA6P31267 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.39■□□□□ 0.37
HOXA6P31267 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA6P31267 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA6P31267 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.39■□□□□ 0.37
HOXA6P31267 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA6P31267 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA6P31267 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.39■□□□□ 0.37
HOXA6P31267 AC073130.3-201ENST00000624389 2278 ntBASIC17.38■□□□□ 0.37
HOXA6P31267 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.38■□□□□ 0.37
HOXA6P31267 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.38■□□□□ 0.37
HOXA6P31267 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
HOXA6P31267 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HOXA6P31267 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HOXA6P31267 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms