Protein–RNA interactions for Protein: P30260

CDC27, Cell division cycle protein 27 homolog, humanhuman

Predictions only

Length 824 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27P30260 SIRPAP1-201ENST00000448467 1770 ntBASIC20.59■□□□□ 0.89
CDC27P30260 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDC27P30260 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDC27P30260 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.59■□□□□ 0.89
CDC27P30260 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDC27P30260 TP73-AS1-210ENST00000637775 1455 ntBASIC20.59■□□□□ 0.89
CDC27P30260 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDC27P30260 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CDC27P30260 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDC27P30260 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
CDC27P30260 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDC27P30260 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.59■□□□□ 0.89
CDC27P30260 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDC27P30260 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
CDC27P30260 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.59■□□□□ 0.89
CDC27P30260 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC20.59■□□□□ 0.89
CDC27P30260 AC005104.2-201ENST00000427818 678 ntBASIC20.59■□□□□ 0.89
CDC27P30260 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.59■□□□□ 0.89
CDC27P30260 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.59■□□□□ 0.89
CDC27P30260 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.59■□□□□ 0.89
CDC27P30260 AC012615.1-201ENST00000565797 1299 ntBASIC20.59■□□□□ 0.89
CDC27P30260 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.59■□□□□ 0.89
CDC27P30260 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDC27P30260 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
CDC27P30260 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CDC27P30260 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDC27P30260 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDC27P30260 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDC27P30260 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.59■□□□□ 0.89
CDC27P30260 LTB4R2-202ENST00000528054 3092 ntBASIC20.59■□□□□ 0.89
CDC27P30260 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.59■□□□□ 0.89
CDC27P30260 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDC27P30260 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CDC27P30260 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.59■□□□□ 0.89
CDC27P30260 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CDC27P30260 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.58■□□□□ 0.89
CDC27P30260 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDC27P30260 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.58■□□□□ 0.89
CDC27P30260 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.58■□□□□ 0.89
CDC27P30260 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDC27P30260 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.58■□□□□ 0.89
CDC27P30260 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDC27P30260 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
CDC27P30260 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CDC27P30260 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CDC27P30260 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.58■□□□□ 0.89
CDC27P30260 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CDC27P30260 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDC27P30260 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.58■□□□□ 0.89
CDC27P30260 HCG4P8-203ENST00000443049 980 ntBASIC20.58■□□□□ 0.89
CDC27P30260 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.58■□□□□ 0.89
CDC27P30260 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.58■□□□□ 0.89
CDC27P30260 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.58■□□□□ 0.89
CDC27P30260 AC011467.2-201ENST00000598425 242 ntBASIC20.58■□□□□ 0.89
CDC27P30260 AC019129.2-201ENST00000609837 1235 ntBASIC20.58■□□□□ 0.89
CDC27P30260 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.58■□□□□ 0.89
CDC27P30260 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.58■□□□□ 0.89
CDC27P30260 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CDC27P30260 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDC27P30260 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CDC27P30260 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.58■□□□□ 0.88
CDC27P30260 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDC27P30260 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDC27P30260 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDC27P30260 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDC27P30260 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDC27P30260 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDC27P30260 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDC27P30260 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDC27P30260 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20.57■□□□□ 0.88
CDC27P30260 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
CDC27P30260 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDC27P30260 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.57■□□□□ 0.88
CDC27P30260 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDC27P30260 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.57■□□□□ 0.88
CDC27P30260 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDC27P30260 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDC27P30260 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDC27P30260 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
CDC27P30260 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CDC27P30260 RCN1P2-201ENST00000398357 915 ntBASIC20.57■□□□□ 0.88
CDC27P30260 MINOS1P3-201ENST00000457048 203 ntBASIC20.57■□□□□ 0.88
CDC27P30260 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
CDC27P30260 AC104819.1-201ENST00000504587 486 ntBASIC20.57■□□□□ 0.88
CDC27P30260 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.57■□□□□ 0.88
CDC27P30260 AC009533.2-201ENST00000543664 586 ntBASIC20.57■□□□□ 0.88
CDC27P30260 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.57■□□□□ 0.88
CDC27P30260 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.57■□□□□ 0.88
CDC27P30260 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDC27P30260 LINC01451-201ENST00000623792 534 ntBASIC20.57■□□□□ 0.88
CDC27P30260 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CDC27P30260 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDC27P30260 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDC27P30260 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDC27P30260 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDC27P30260 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CDC27P30260 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDC27P30260 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDC27P30260 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDC27P30260 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms