Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR2AP24928 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC20.67■□□□□ 0.9
POLR2AP24928 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC20.67■□□□□ 0.9
POLR2AP24928 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC20.67■□□□□ 0.9
POLR2AP24928 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC20.67■□□□□ 0.9
POLR2AP24928 AC005225.4-201ENST00000557330 545 ntBASIC20.67■□□□□ 0.9
POLR2AP24928 AC015911.4-201ENST00000588022 1070 ntBASIC20.67■□□□□ 0.9
POLR2AP24928 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC20.67■□□□□ 0.9
POLR2AP24928 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.67■□□□□ 0.9
POLR2AP24928 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR2AP24928 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR2AP24928 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR2AP24928 CYP51A1P2-201ENST00000419457 1499 ntBASIC20.67■□□□□ 0.9
POLR2AP24928 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.67■□□□□ 0.9
POLR2AP24928 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
POLR2AP24928 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
POLR2AP24928 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
POLR2AP24928 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
POLR2AP24928 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
POLR2AP24928 AC116562.4-201ENST00000641316 2276 ntBASIC20.67■□□□□ 0.9
POLR2AP24928 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR2AP24928 AC055876.3-201ENST00000431496 288 ntBASIC20.66■□□□□ 0.9
POLR2AP24928 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC20.66■□□□□ 0.9
POLR2AP24928 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC20.66■□□□□ 0.9
POLR2AP24928 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC20.66■□□□□ 0.9
POLR2AP24928 UGT1A2P-201ENST00000454886 866 ntBASIC20.66■□□□□ 0.9
POLR2AP24928 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR2AP24928 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC20.66■□□□□ 0.9
POLR2AP24928 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC20.66■□□□□ 0.9
POLR2AP24928 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR2AP24928 AC138649.4-201ENST00000612222 287 ntBASIC20.66■□□□□ 0.9
POLR2AP24928 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR2AP24928 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR2AP24928 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR2AP24928 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC20.66■□□□□ 0.9
POLR2AP24928 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR2AP24928 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR2AP24928 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.66■□□□□ 0.9
POLR2AP24928 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR2AP24928 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR2AP24928 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.66■□□□□ 0.9
POLR2AP24928 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR2AP24928 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.66■□□□□ 0.9
POLR2AP24928 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR2AP24928 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
POLR2AP24928 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR2AP24928 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
POLR2AP24928 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC20.66■□□□□ 0.9
POLR2AP24928 PUDP-206ENST00000540122 825 ntTSL 2 BASIC20.66■□□□□ 0.9
POLR2AP24928 THTPA-204ENST00000554970 569 ntTSL 4 BASIC20.66■□□□□ 0.9
POLR2AP24928 THTPA-206ENST00000556015 535 ntTSL 3 BASIC20.66■□□□□ 0.9
POLR2AP24928 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
POLR2AP24928 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR2AP24928 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR2AP24928 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR2AP24928 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
POLR2AP24928 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
POLR2AP24928 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
POLR2AP24928 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
POLR2AP24928 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
POLR2AP24928 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
POLR2AP24928 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR2AP24928 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR2AP24928 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.65■□□□□ 0.9
POLR2AP24928 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR2AP24928 METTL26-204ENST00000397665 558 ntTSL 2 BASIC20.65■□□□□ 0.9
POLR2AP24928 AC005034.1-201ENST00000426657 489 ntBASIC20.65■□□□□ 0.9
POLR2AP24928 FAM58DP-201ENST00000428076 619 ntBASIC20.65■□□□□ 0.9
POLR2AP24928 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR2AP24928 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
POLR2AP24928 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
POLR2AP24928 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.65■□□□□ 0.9
POLR2AP24928 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR2AP24928 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
POLR2AP24928 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
POLR2AP24928 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR2AP24928 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR2AP24928 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR2AP24928 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
POLR2AP24928 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC20.65■□□□□ 0.9
POLR2AP24928 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
POLR2AP24928 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC20.65■□□□□ 0.9
POLR2AP24928 TFAMP1-201ENST00000412727 736 ntBASIC20.65■□□□□ 0.9
POLR2AP24928 FALEC-201ENST00000416894 566 ntTSL 3 BASIC20.65■□□□□ 0.9
POLR2AP24928 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC20.65■□□□□ 0.9
POLR2AP24928 AC112191.1-201ENST00000523689 701 ntBASIC20.65■□□□□ 0.9
POLR2AP24928 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC20.65■□□□□ 0.9
POLR2AP24928 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.65■□□□□ 0.9
POLR2AP24928 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC20.65■□□□□ 0.9
POLR2AP24928 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
POLR2AP24928 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.64■□□□□ 0.9
POLR2AP24928 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
POLR2AP24928 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.64■□□□□ 0.9
POLR2AP24928 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.64■□□□□ 0.9
POLR2AP24928 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.9
POLR2AP24928 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
POLR2AP24928 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.64■□□□□ 0.89
POLR2AP24928 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
POLR2AP24928 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.64■□□□□ 0.89
POLR2AP24928 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms