Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 TSPY5P-201ENST00000426936 936 ntBASIC15.28■□□□□ 0.04
CCL1P22362 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.28■□□□□ 0.04
CCL1P22362 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.28■□□□□ 0.04
CCL1P22362 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.28■□□□□ 0.04
CCL1P22362 AC002558.1-201ENST00000488906 803 ntBASIC15.28■□□□□ 0.04
CCL1P22362 TK2-213ENST00000563369 882 ntTSL 5 BASIC15.28■□□□□ 0.04
CCL1P22362 AC005332.3-201ENST00000589904 676 ntBASIC15.28■□□□□ 0.04
CCL1P22362 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCL1P22362 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL1P22362 AC022211.2-201ENST00000585075 2527 ntBASIC15.28■□□□□ 0.04
CCL1P22362 HCG11-201ENST00000411553 5696 ntBASIC15.28■□□□□ 0.04
CCL1P22362 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL1P22362 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCL1P22362 FZD10-202ENST00000539839 3282 ntBASIC15.28■□□□□ 0.04
CCL1P22362 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL1P22362 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL1P22362 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCL1P22362 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCL1P22362 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CCL1P22362 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCL1P22362 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.27■□□□□ 0.04
CCL1P22362 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCL1P22362 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCL1P22362 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC15.27■□□□□ 0.04
CCL1P22362 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.27■□□□□ 0.04
CCL1P22362 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.27■□□□□ 0.04
CCL1P22362 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCL1P22362 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCL1P22362 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCL1P22362 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.27■□□□□ 0.04
CCL1P22362 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.27■□□□□ 0.04
CCL1P22362 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCL1P22362 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.27■□□□□ 0.04
CCL1P22362 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.27■□□□□ 0.04
CCL1P22362 AL139327.4-201ENST00000612362 153 ntBASIC15.27■□□□□ 0.04
CCL1P22362 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.27■□□□□ 0.04
CCL1P22362 AC116353.5-201ENST00000638148 1699 ntBASIC15.27■□□□□ 0.03
CCL1P22362 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCL1P22362 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.27■□□□□ 0.03
CCL1P22362 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.27■□□□□ 0.03
CCL1P22362 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC15.27■□□□□ 0.03
CCL1P22362 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCL1P22362 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
CCL1P22362 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCL1P22362 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.27■□□□□ 0.03
CCL1P22362 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.27■□□□□ 0.03
CCL1P22362 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CCL1P22362 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CCL1P22362 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL1P22362 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL1P22362 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL1P22362 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL1P22362 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL1P22362 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL1P22362 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.26■□□□□ 0.03
CCL1P22362 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.26■□□□□ 0.03
CCL1P22362 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.26■□□□□ 0.03
CCL1P22362 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.26■□□□□ 0.03
CCL1P22362 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCL1P22362 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL1P22362 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL1P22362 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL1P22362 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL1P22362 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCL1P22362 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CCL1P22362 AC005521.1-201ENST00000393351 872 ntBASIC15.26■□□□□ 0.03
CCL1P22362 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.26■□□□□ 0.03
CCL1P22362 AC112907.2-201ENST00000448639 330 ntBASIC15.26■□□□□ 0.03
CCL1P22362 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC15.26■□□□□ 0.03
CCL1P22362 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.26■□□□□ 0.03
CCL1P22362 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.26■□□□□ 0.03
CCL1P22362 AL359075.1-203ENST00000462729 1002 ntBASIC15.26■□□□□ 0.03
CCL1P22362 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.26■□□□□ 0.03
CCL1P22362 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCL1P22362 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.26■□□□□ 0.03
CCL1P22362 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.26■□□□□ 0.03
CCL1P22362 AC006011.2-201ENST00000621313 1158 ntBASIC15.26■□□□□ 0.03
CCL1P22362 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL1P22362 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL1P22362 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCL1P22362 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.26■□□□□ 0.03
CCL1P22362 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL1P22362 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL1P22362 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL1P22362 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL1P22362 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.26■□□□□ 0.03
CCL1P22362 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCL1P22362 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL1P22362 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
CCL1P22362 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.25■□□□□ 0.03
CCL1P22362 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCL1P22362 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL1P22362 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCL1P22362 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CCL1P22362 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL1P22362 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL1P22362 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL1P22362 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CCL1P22362 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL1P22362 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms