Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
NCLP19338 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
NCLP19338 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NCLP19338 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NCLP19338 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.16■□□□□ 0.98
NCLP19338 LINC01568-207ENST00000641790 1380 ntBASIC21.16■□□□□ 0.98
NCLP19338 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
NCLP19338 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
NCLP19338 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
NCLP19338 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
NCLP19338 MIR1224-201ENST00000408193 85 ntBASIC21.16■□□□□ 0.98
NCLP19338 MFAP1P1-201ENST00000442257 1255 ntBASIC21.16■□□□□ 0.98
NCLP19338 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NCLP19338 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.16■□□□□ 0.98
NCLP19338 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.16■□□□□ 0.98
NCLP19338 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.16■□□□□ 0.98
NCLP19338 AP005242.2-201ENST00000580065 1175 ntBASIC21.16■□□□□ 0.98
NCLP19338 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.16■□□□□ 0.98
NCLP19338 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.16■□□□□ 0.98
NCLP19338 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
NCLP19338 AC011676.5-201ENST00000624864 2660 ntBASIC21.16■□□□□ 0.98
NCLP19338 NKILA-202ENST00000614771 2598 ntBASIC21.16■□□□□ 0.98
NCLP19338 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
NCLP19338 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NCLP19338 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
NCLP19338 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NCLP19338 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NCLP19338 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
NCLP19338 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
NCLP19338 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NCLP19338 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC21.15■□□□□ 0.98
NCLP19338 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NCLP19338 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NCLP19338 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NCLP19338 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NCLP19338 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21.15■□□□□ 0.98
NCLP19338 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.15■□□□□ 0.98
NCLP19338 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
NCLP19338 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
NCLP19338 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NCLP19338 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
NCLP19338 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NCLP19338 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC21.15■□□□□ 0.98
NCLP19338 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
NCLP19338 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC21.15■□□□□ 0.98
NCLP19338 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NCLP19338 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
NCLP19338 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NCLP19338 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NCLP19338 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NCLP19338 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NCLP19338 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
NCLP19338 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC21.14■□□□□ 0.98
NCLP19338 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NCLP19338 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NCLP19338 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
NCLP19338 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NCLP19338 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NCLP19338 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.14■□□□□ 0.97
NCLP19338 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.14■□□□□ 0.97
NCLP19338 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC21.14■□□□□ 0.97
NCLP19338 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.14■□□□□ 0.97
NCLP19338 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
NCLP19338 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.14■□□□□ 0.97
NCLP19338 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NCLP19338 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.14■□□□□ 0.97
NCLP19338 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NCLP19338 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC21.14■□□□□ 0.97
NCLP19338 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC21.14■□□□□ 0.97
NCLP19338 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NCLP19338 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC21.14■□□□□ 0.97
NCLP19338 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC21.14■□□□□ 0.97
NCLP19338 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
NCLP19338 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC21.14■□□□□ 0.97
NCLP19338 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NCLP19338 LTF-203ENST00000426532 2494 ntTSL 2 BASIC21.14■□□□□ 0.97
NCLP19338 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
NCLP19338 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NCLP19338 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NCLP19338 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC21.13■□□□□ 0.97
NCLP19338 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NCLP19338 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
NCLP19338 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC21.13■□□□□ 0.97
NCLP19338 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC21.13■□□□□ 0.97
NCLP19338 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NCLP19338 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
NCLP19338 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.13■□□□□ 0.97
NCLP19338 AC097488.1-201ENST00000507834 756 ntBASIC21.13■□□□□ 0.97
NCLP19338 AC005363.2-201ENST00000618631 242 ntBASIC21.13■□□□□ 0.97
NCLP19338 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC21.13■□□□□ 0.97
NCLP19338 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC21.13■□□□□ 0.97
NCLP19338 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
NCLP19338 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NCLP19338 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC21.13■□□□□ 0.97
NCLP19338 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
NCLP19338 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NCLP19338 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC21.13■□□□□ 0.97
NCLP19338 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC21.13■□□□□ 0.97
NCLP19338 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
NCLP19338 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms