Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.74■□□□□ 0.43
XRCC1P18887 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
XRCC1P18887 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
XRCC1P18887 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
XRCC1P18887 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
XRCC1P18887 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
XRCC1P18887 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
XRCC1P18887 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
XRCC1P18887 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.73■□□□□ 0.43
XRCC1P18887 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
XRCC1P18887 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
XRCC1P18887 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.73■□□□□ 0.43
XRCC1P18887 RN7SL606P-201ENST00000472779 293 ntBASIC17.73■□□□□ 0.43
XRCC1P18887 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.73■□□□□ 0.43
XRCC1P18887 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.73■□□□□ 0.43
XRCC1P18887 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.73■□□□□ 0.43
XRCC1P18887 MIR3652-201ENST00000579335 131 ntBASIC17.73■□□□□ 0.43
XRCC1P18887 CLEC4GP1-201ENST00000596555 870 ntBASIC17.73■□□□□ 0.43
XRCC1P18887 AC004263.2-201ENST00000617183 678 ntBASIC17.73■□□□□ 0.43
XRCC1P18887 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
XRCC1P18887 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
XRCC1P18887 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
XRCC1P18887 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
XRCC1P18887 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
XRCC1P18887 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
XRCC1P18887 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.73■□□□□ 0.43
XRCC1P18887 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
XRCC1P18887 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
XRCC1P18887 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
XRCC1P18887 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
XRCC1P18887 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
XRCC1P18887 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
XRCC1P18887 TNRC18P3-201ENST00000441896 2691 ntBASIC17.72■□□□□ 0.43
XRCC1P18887 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
XRCC1P18887 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
XRCC1P18887 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.72■□□□□ 0.43
XRCC1P18887 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
XRCC1P18887 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
XRCC1P18887 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.72■□□□□ 0.43
XRCC1P18887 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.72■□□□□ 0.43
XRCC1P18887 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
XRCC1P18887 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
XRCC1P18887 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
XRCC1P18887 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
XRCC1P18887 KRT126P-201ENST00000549467 1181 ntBASIC17.72■□□□□ 0.43
XRCC1P18887 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.72■□□□□ 0.43
XRCC1P18887 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.72■□□□□ 0.43
XRCC1P18887 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.72■□□□□ 0.43
XRCC1P18887 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
XRCC1P18887 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
XRCC1P18887 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
XRCC1P18887 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
XRCC1P18887 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
XRCC1P18887 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
XRCC1P18887 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.72■□□□□ 0.43
XRCC1P18887 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
XRCC1P18887 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
XRCC1P18887 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
XRCC1P18887 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.71■□□□□ 0.43
XRCC1P18887 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
XRCC1P18887 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.71■□□□□ 0.43
XRCC1P18887 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
XRCC1P18887 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
XRCC1P18887 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
XRCC1P18887 PP12613-201ENST00000424958 2230 ntBASIC17.71■□□□□ 0.43
XRCC1P18887 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
XRCC1P18887 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.71■□□□□ 0.43
XRCC1P18887 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.71■□□□□ 0.43
XRCC1P18887 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
XRCC1P18887 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
XRCC1P18887 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.71■□□□□ 0.43
XRCC1P18887 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
XRCC1P18887 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
XRCC1P18887 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
XRCC1P18887 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
XRCC1P18887 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.71■□□□□ 0.43
XRCC1P18887 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
XRCC1P18887 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.71■□□□□ 0.43
XRCC1P18887 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
XRCC1P18887 DUSP5P1-201ENST00000441325 1139 ntBASIC17.71■□□□□ 0.43
XRCC1P18887 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.71■□□□□ 0.43
XRCC1P18887 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.71■□□□□ 0.43
XRCC1P18887 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.71■□□□□ 0.43
XRCC1P18887 AC124864.1-201ENST00000623408 392 ntBASIC17.71■□□□□ 0.43
XRCC1P18887 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
XRCC1P18887 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
XRCC1P18887 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
XRCC1P18887 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.71■□□□□ 0.43
XRCC1P18887 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
XRCC1P18887 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.71■□□□□ 0.43
XRCC1P18887 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
XRCC1P18887 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
XRCC1P18887 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.71■□□□□ 0.42
XRCC1P18887 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
XRCC1P18887 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
XRCC1P18887 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
XRCC1P18887 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
XRCC1P18887 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
XRCC1P18887 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
XRCC1P18887 AC099343.3-201ENST00000605834 2503 ntBASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms