Protein–RNA interactions for Protein: P16383

GCFC2, GC-rich sequence DNA-binding factor 2, humanhuman

Known RBP Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2P16383 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
GCFC2P16383 AC002558.1-201ENST00000488906 803 ntBASIC20.06■□□□□ 0.8
GCFC2P16383 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.06■□□□□ 0.8
GCFC2P16383 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.06■□□□□ 0.8
GCFC2P16383 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.06■□□□□ 0.8
GCFC2P16383 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.06■□□□□ 0.8
GCFC2P16383 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
GCFC2P16383 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.06■□□□□ 0.8
GCFC2P16383 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GCFC2P16383 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
GCFC2P16383 AC068880.1-201ENST00000507289 2297 ntBASIC20.06■□□□□ 0.8
GCFC2P16383 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
GCFC2P16383 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.06■□□□□ 0.8
GCFC2P16383 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
GCFC2P16383 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GCFC2P16383 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.05■□□□□ 0.8
GCFC2P16383 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GCFC2P16383 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GCFC2P16383 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20.05■□□□□ 0.8
GCFC2P16383 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
GCFC2P16383 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
GCFC2P16383 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GCFC2P16383 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GCFC2P16383 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GCFC2P16383 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GCFC2P16383 AC134043.2-201ENST00000624206 2238 ntBASIC20.05■□□□□ 0.8
GCFC2P16383 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GCFC2P16383 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GCFC2P16383 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
GCFC2P16383 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GCFC2P16383 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.05■□□□□ 0.8
GCFC2P16383 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GCFC2P16383 TSPY19P-201ENST00000418461 509 ntBASIC20.05■□□□□ 0.8
GCFC2P16383 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.05■□□□□ 0.8
GCFC2P16383 TSPY18P-201ENST00000441642 509 ntBASIC20.05■□□□□ 0.8
GCFC2P16383 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.05■□□□□ 0.8
GCFC2P16383 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.05■□□□□ 0.8
GCFC2P16383 MIR5100-201ENST00000579544 119 ntBASIC20.05■□□□□ 0.8
GCFC2P16383 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.05■□□□□ 0.8
GCFC2P16383 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.05■□□□□ 0.8
GCFC2P16383 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GCFC2P16383 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GCFC2P16383 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.05■□□□□ 0.8
GCFC2P16383 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
GCFC2P16383 REXO1L11P-201ENST00000620964 1927 ntBASIC20.05■□□□□ 0.8
GCFC2P16383 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
GCFC2P16383 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
GCFC2P16383 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GCFC2P16383 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GCFC2P16383 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
GCFC2P16383 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GCFC2P16383 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GCFC2P16383 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
GCFC2P16383 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
GCFC2P16383 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GCFC2P16383 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GCFC2P16383 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
GCFC2P16383 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GCFC2P16383 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GCFC2P16383 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
GCFC2P16383 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
GCFC2P16383 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GCFC2P16383 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GCFC2P16383 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GCFC2P16383 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
GCFC2P16383 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.04■□□□□ 0.8
GCFC2P16383 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GCFC2P16383 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GCFC2P16383 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GCFC2P16383 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.04■□□□□ 0.8
GCFC2P16383 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
GCFC2P16383 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.04■□□□□ 0.8
GCFC2P16383 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.04■□□□□ 0.8
GCFC2P16383 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GCFC2P16383 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.04■□□□□ 0.8
GCFC2P16383 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
GCFC2P16383 LINC00304-203ENST00000565008 1864 ntBASIC20.04■□□□□ 0.8
GCFC2P16383 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.04■□□□□ 0.8
GCFC2P16383 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
GCFC2P16383 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
GCFC2P16383 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GCFC2P16383 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GCFC2P16383 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.04■□□□□ 0.8
GCFC2P16383 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
GCFC2P16383 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
GCFC2P16383 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GCFC2P16383 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.03■□□□□ 0.8
GCFC2P16383 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GCFC2P16383 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.03■□□□□ 0.8
GCFC2P16383 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GCFC2P16383 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GCFC2P16383 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.03■□□□□ 0.8
GCFC2P16383 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.03■□□□□ 0.8
GCFC2P16383 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.03■□□□□ 0.8
GCFC2P16383 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
GCFC2P16383 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GCFC2P16383 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GCFC2P16383 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GCFC2P16383 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
GCFC2P16383 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms