Protein–RNA interactions for Protein: P15884

TCF4, Transcription factor 4, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4P15884 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TCF4P15884 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.51■□□□□ 0.55
TCF4P15884 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TCF4P15884 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TCF4P15884 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.51■□□□□ 0.55
TCF4P15884 LINC01238-205ENST00000567549 1107 ntBASIC18.51■□□□□ 0.55
TCF4P15884 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.51■□□□□ 0.55
TCF4P15884 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
TCF4P15884 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TCF4P15884 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TCF4P15884 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TCF4P15884 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.51■□□□□ 0.55
TCF4P15884 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TCF4P15884 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TCF4P15884 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TCF4P15884 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TCF4P15884 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.51■□□□□ 0.55
TCF4P15884 AL138688.1-201ENST00000624851 1594 ntBASIC18.51■□□□□ 0.55
TCF4P15884 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.5■□□□□ 0.55
TCF4P15884 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TCF4P15884 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TCF4P15884 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TCF4P15884 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TCF4P15884 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.5■□□□□ 0.55
TCF4P15884 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.5■□□□□ 0.55
TCF4P15884 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TCF4P15884 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TCF4P15884 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.5■□□□□ 0.55
TCF4P15884 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.5■□□□□ 0.55
TCF4P15884 FAM86EP-206ENST00000510506 987 ntBASIC18.5■□□□□ 0.55
TCF4P15884 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.5■□□□□ 0.55
TCF4P15884 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
TCF4P15884 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.5■□□□□ 0.55
TCF4P15884 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.5■□□□□ 0.55
TCF4P15884 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TCF4P15884 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.5■□□□□ 0.55
TCF4P15884 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.5■□□□□ 0.55
TCF4P15884 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
TCF4P15884 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TCF4P15884 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.5■□□□□ 0.55
TCF4P15884 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TCF4P15884 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.5■□□□□ 0.55
TCF4P15884 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.5■□□□□ 0.55
TCF4P15884 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TCF4P15884 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TCF4P15884 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TCF4P15884 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
TCF4P15884 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.5■□□□□ 0.55
TCF4P15884 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TCF4P15884 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.5■□□□□ 0.55
TCF4P15884 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TCF4P15884 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
TCF4P15884 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCF4P15884 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TCF4P15884 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCF4P15884 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCF4P15884 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCF4P15884 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TCF4P15884 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TCF4P15884 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
TCF4P15884 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCF4P15884 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.49■□□□□ 0.55
TCF4P15884 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCF4P15884 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCF4P15884 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.49■□□□□ 0.55
TCF4P15884 AC091607.1-201ENST00000490318 1060 ntBASIC18.49■□□□□ 0.55
TCF4P15884 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TCF4P15884 AL592071.1-201ENST00000611956 408 ntBASIC18.49■□□□□ 0.55
TCF4P15884 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.49■□□□□ 0.55
TCF4P15884 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TCF4P15884 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
TCF4P15884 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCF4P15884 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCF4P15884 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
TCF4P15884 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
TCF4P15884 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCF4P15884 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCF4P15884 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCF4P15884 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCF4P15884 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCF4P15884 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCF4P15884 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TCF4P15884 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCF4P15884 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCF4P15884 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TCF4P15884 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TCF4P15884 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TCF4P15884 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.48■□□□□ 0.55
TCF4P15884 PCDHA12-202ENST00000613593 2588 ntBASIC18.48■□□□□ 0.55
TCF4P15884 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TCF4P15884 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
TCF4P15884 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TCF4P15884 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TCF4P15884 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.48■□□□□ 0.55
TCF4P15884 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TCF4P15884 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TCF4P15884 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.48■□□□□ 0.55
TCF4P15884 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TCF4P15884 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TCF4P15884 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms