Protein–RNA interactions for Protein: P12074

COX6A1, Cytochrome c oxidase subunit 6A1, mitochondrial, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1P12074 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
COX6A1P12074 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
COX6A1P12074 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COX6A1P12074 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
COX6A1P12074 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COX6A1P12074 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.33■□□□□ 0.2
COX6A1P12074 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
COX6A1P12074 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.33■□□□□ 0.2
COX6A1P12074 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
COX6A1P12074 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
COX6A1P12074 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COX6A1P12074 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
COX6A1P12074 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.33■□□□□ 0.2
COX6A1P12074 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.33■□□□□ 0.2
COX6A1P12074 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
COX6A1P12074 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COX6A1P12074 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
COX6A1P12074 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COX6A1P12074 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COX6A1P12074 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
COX6A1P12074 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.32■□□□□ 0.2
COX6A1P12074 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COX6A1P12074 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.32■□□□□ 0.2
COX6A1P12074 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COX6A1P12074 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.32■□□□□ 0.2
COX6A1P12074 KRT18P27-201ENST00000427733 1299 ntBASIC16.32■□□□□ 0.2
COX6A1P12074 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COX6A1P12074 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COX6A1P12074 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.32■□□□□ 0.2
COX6A1P12074 AC002558.1-201ENST00000488906 803 ntBASIC16.32■□□□□ 0.2
COX6A1P12074 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COX6A1P12074 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
COX6A1P12074 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
COX6A1P12074 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.32■□□□□ 0.2
COX6A1P12074 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
COX6A1P12074 AC117500.6-201ENST00000624871 588 ntBASIC16.32■□□□□ 0.2
COX6A1P12074 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COX6A1P12074 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
COX6A1P12074 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COX6A1P12074 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COX6A1P12074 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COX6A1P12074 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COX6A1P12074 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
COX6A1P12074 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COX6A1P12074 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
COX6A1P12074 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COX6A1P12074 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COX6A1P12074 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COX6A1P12074 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COX6A1P12074 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COX6A1P12074 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.31■□□□□ 0.2
COX6A1P12074 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
COX6A1P12074 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.31■□□□□ 0.2
COX6A1P12074 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COX6A1P12074 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COX6A1P12074 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
COX6A1P12074 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COX6A1P12074 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COX6A1P12074 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COX6A1P12074 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COX6A1P12074 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.31■□□□□ 0.2
COX6A1P12074 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.31■□□□□ 0.2
COX6A1P12074 POLD2P1-201ENST00000511220 997 ntBASIC16.31■□□□□ 0.2
COX6A1P12074 RNA5SP415-201ENST00000517246 115 ntBASIC16.31■□□□□ 0.2
COX6A1P12074 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.31■□□□□ 0.2
COX6A1P12074 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COX6A1P12074 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COX6A1P12074 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.31■□□□□ 0.2
COX6A1P12074 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.31■□□□□ 0.2
COX6A1P12074 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.31■□□□□ 0.2
COX6A1P12074 AL356488.2-201ENST00000602755 427 ntBASIC16.31■□□□□ 0.2
COX6A1P12074 Z83851.2-201ENST00000609564 659 ntBASIC16.31■□□□□ 0.2
COX6A1P12074 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
COX6A1P12074 AL589182.2-201ENST00000619332 1049 ntBASIC16.31■□□□□ 0.2
COX6A1P12074 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COX6A1P12074 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
COX6A1P12074 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
COX6A1P12074 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.31■□□□□ 0.2
COX6A1P12074 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.31■□□□□ 0.2
COX6A1P12074 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COX6A1P12074 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
COX6A1P12074 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
COX6A1P12074 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COX6A1P12074 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
COX6A1P12074 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
COX6A1P12074 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COX6A1P12074 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
COX6A1P12074 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
COX6A1P12074 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COX6A1P12074 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.3■□□□□ 0.2
COX6A1P12074 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COX6A1P12074 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
COX6A1P12074 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.3■□□□□ 0.2
COX6A1P12074 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.3■□□□□ 0.2
COX6A1P12074 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
COX6A1P12074 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COX6A1P12074 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COX6A1P12074 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
COX6A1P12074 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COX6A1P12074 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms