Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PF4V1P10720 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PF4V1P10720 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PF4V1P10720 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PF4V1P10720 AC093010.1-201ENST00000473625 1624 ntBASIC14.09□□□□□ -0.15
PF4V1P10720 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
PF4V1P10720 MADD-208ENST00000405573 1823 ntTSL 5 BASIC14.09□□□□□ -0.15
PF4V1P10720 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PF4V1P10720 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
PF4V1P10720 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PF4V1P10720 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC14.09□□□□□ -0.15
PF4V1P10720 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PF4V1P10720 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PF4V1P10720 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PF4V1P10720 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PF4V1P10720 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PF4V1P10720 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PF4V1P10720 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
PF4V1P10720 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PF4V1P10720 AC009154.2-201ENST00000621177 724 ntBASIC14.09□□□□□ -0.15
PF4V1P10720 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC14.09□□□□□ -0.15
PF4V1P10720 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PF4V1P10720 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PF4V1P10720 POR-209ENST00000439269 1858 ntTSL 2 BASIC14.09□□□□□ -0.15
PF4V1P10720 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PF4V1P10720 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PF4V1P10720 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PF4V1P10720 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PF4V1P10720 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PF4V1P10720 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PF4V1P10720 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC14.09□□□□□ -0.15
PF4V1P10720 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
PF4V1P10720 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC14.09□□□□□ -0.15
PF4V1P10720 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
PF4V1P10720 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PF4V1P10720 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PF4V1P10720 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PF4V1P10720 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PF4V1P10720 COMP-202ENST00000425807 2292 ntTSL 2 BASIC14.08□□□□□ -0.15
PF4V1P10720 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC14.08□□□□□ -0.15
PF4V1P10720 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PF4V1P10720 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
PF4V1P10720 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
PF4V1P10720 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.08□□□□□ -0.16
PF4V1P10720 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC14.08□□□□□ -0.16
PF4V1P10720 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
PF4V1P10720 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PF4V1P10720 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC14.08□□□□□ -0.16
PF4V1P10720 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
PF4V1P10720 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PF4V1P10720 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PF4V1P10720 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.08□□□□□ -0.16
PF4V1P10720 KRT18P65-201ENST00000439811 1286 ntBASIC14.08□□□□□ -0.16
PF4V1P10720 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PF4V1P10720 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.08□□□□□ -0.16
PF4V1P10720 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PF4V1P10720 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.08□□□□□ -0.16
PF4V1P10720 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.08□□□□□ -0.16
PF4V1P10720 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC14.08□□□□□ -0.16
PF4V1P10720 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.08□□□□□ -0.16
PF4V1P10720 AL353801.3-201ENST00000609898 542 ntBASIC14.08□□□□□ -0.16
PF4V1P10720 AL031008.1-201ENST00000619963 541 ntBASIC14.08□□□□□ -0.16
PF4V1P10720 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.08□□□□□ -0.16
PF4V1P10720 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.08□□□□□ -0.16
PF4V1P10720 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC14.08□□□□□ -0.16
PF4V1P10720 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PF4V1P10720 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PF4V1P10720 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PF4V1P10720 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PF4V1P10720 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PF4V1P10720 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PF4V1P10720 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
PF4V1P10720 AC022898.2-201ENST00000616822 1312 ntBASIC14.08□□□□□ -0.16
PF4V1P10720 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PF4V1P10720 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PF4V1P10720 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.08□□□□□ -0.16
PF4V1P10720 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PF4V1P10720 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.08□□□□□ -0.16
PF4V1P10720 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PF4V1P10720 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PF4V1P10720 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PF4V1P10720 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PF4V1P10720 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
PF4V1P10720 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
PF4V1P10720 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PF4V1P10720 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.07□□□□□ -0.16
PF4V1P10720 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PF4V1P10720 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PF4V1P10720 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
PF4V1P10720 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PF4V1P10720 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PF4V1P10720 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC14.07□□□□□ -0.16
PF4V1P10720 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC14.07□□□□□ -0.16
PF4V1P10720 NSUN5P1-202ENST00000421140 1535 ntBASIC14.07□□□□□ -0.16
PF4V1P10720 NSUN5P2-203ENST00000457352 1529 ntBASIC14.07□□□□□ -0.16
PF4V1P10720 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PF4V1P10720 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PF4V1P10720 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PF4V1P10720 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PF4V1P10720 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms