Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
ERCC1P07992 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
ERCC1P07992 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ERCC1P07992 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.78■□□□□ 0.12
ERCC1P07992 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ERCC1P07992 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
ERCC1P07992 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ERCC1P07992 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
ERCC1P07992 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
ERCC1P07992 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ERCC1P07992 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ERCC1P07992 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ERCC1P07992 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ERCC1P07992 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ERCC1P07992 HBZP1-201ENST00000354915 429 ntBASIC15.78■□□□□ 0.12
ERCC1P07992 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.78■□□□□ 0.12
ERCC1P07992 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.78■□□□□ 0.12
ERCC1P07992 SEC1P-202ENST00000473944 940 ntBASIC15.78■□□□□ 0.12
ERCC1P07992 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.78■□□□□ 0.12
ERCC1P07992 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.78■□□□□ 0.12
ERCC1P07992 AC104390.1-201ENST00000555663 520 ntBASIC15.78■□□□□ 0.12
ERCC1P07992 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.78■□□□□ 0.12
ERCC1P07992 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.78■□□□□ 0.12
ERCC1P07992 AC116407.4-201ENST00000623319 1061 ntBASIC15.78■□□□□ 0.12
ERCC1P07992 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
ERCC1P07992 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ERCC1P07992 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ERCC1P07992 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ERCC1P07992 AC106820.2-201ENST00000563775 3264 ntBASIC15.78■□□□□ 0.12
ERCC1P07992 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
ERCC1P07992 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ERCC1P07992 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ERCC1P07992 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ERCC1P07992 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
ERCC1P07992 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.78■□□□□ 0.12
ERCC1P07992 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
ERCC1P07992 FER1L4-210ENST00000615531 5998 ntBASIC15.78■□□□□ 0.12
ERCC1P07992 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ERCC1P07992 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC15.78■□□□□ 0.12
ERCC1P07992 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.78■□□□□ 0.12
ERCC1P07992 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
ERCC1P07992 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ERCC1P07992 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
ERCC1P07992 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ERCC1P07992 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
ERCC1P07992 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
ERCC1P07992 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.77■□□□□ 0.12
ERCC1P07992 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ERCC1P07992 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.12
ERCC1P07992 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.77■□□□□ 0.12
ERCC1P07992 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
ERCC1P07992 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.77■□□□□ 0.12
ERCC1P07992 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.77■□□□□ 0.12
ERCC1P07992 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.77■□□□□ 0.12
ERCC1P07992 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.77■□□□□ 0.12
ERCC1P07992 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
ERCC1P07992 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.12
ERCC1P07992 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.77■□□□□ 0.12
ERCC1P07992 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
ERCC1P07992 AC083849.1-201ENST00000615227 514 ntBASIC15.77■□□□□ 0.12
ERCC1P07992 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.77■□□□□ 0.12
ERCC1P07992 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ERCC1P07992 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ERCC1P07992 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
ERCC1P07992 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
ERCC1P07992 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
ERCC1P07992 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
ERCC1P07992 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
ERCC1P07992 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ERCC1P07992 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.77■□□□□ 0.11
ERCC1P07992 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.77■□□□□ 0.11
ERCC1P07992 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
ERCC1P07992 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ERCC1P07992 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
ERCC1P07992 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.77■□□□□ 0.11
ERCC1P07992 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
ERCC1P07992 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ERCC1P07992 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
ERCC1P07992 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ERCC1P07992 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.77■□□□□ 0.11
ERCC1P07992 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.77■□□□□ 0.11
ERCC1P07992 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ERCC1P07992 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ERCC1P07992 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
ERCC1P07992 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ERCC1P07992 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ERCC1P07992 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ERCC1P07992 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ERCC1P07992 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ERCC1P07992 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ERCC1P07992 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
ERCC1P07992 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ERCC1P07992 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ERCC1P07992 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.76■□□□□ 0.11
ERCC1P07992 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.76■□□□□ 0.11
ERCC1P07992 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.76■□□□□ 0.11
ERCC1P07992 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.76■□□□□ 0.11
ERCC1P07992 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.76■□□□□ 0.11
ERCC1P07992 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
ERCC1P07992 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms