Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RETP07949 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RETP07949 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RETP07949 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RETP07949 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.9■□□□□ 0.46
RETP07949 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RETP07949 AC018470.1-201ENST00000624790 3129 ntBASIC17.89■□□□□ 0.46
RETP07949 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
RETP07949 AC125634.1-201ENST00000438758 1403 ntBASIC17.89■□□□□ 0.46
RETP07949 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RETP07949 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
RETP07949 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RETP07949 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RETP07949 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RETP07949 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.89■□□□□ 0.45
RETP07949 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RETP07949 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RETP07949 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RETP07949 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.89■□□□□ 0.45
RETP07949 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RETP07949 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RETP07949 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RETP07949 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RETP07949 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.89■□□□□ 0.45
RETP07949 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.89■□□□□ 0.45
RETP07949 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RETP07949 YBX1P5-201ENST00000509441 847 ntBASIC17.89■□□□□ 0.45
RETP07949 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RETP07949 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
RETP07949 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.89■□□□□ 0.45
RETP07949 AC239800.4-201ENST00000603712 296 ntBASIC17.89■□□□□ 0.45
RETP07949 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.89■□□□□ 0.45
RETP07949 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RETP07949 AC068587.9-201ENST00000641814 219 ntBASIC17.89■□□□□ 0.45
RETP07949 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.89■□□□□ 0.45
RETP07949 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RETP07949 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RETP07949 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RETP07949 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.89■□□□□ 0.45
RETP07949 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RETP07949 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.89■□□□□ 0.45
RETP07949 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RETP07949 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.89■□□□□ 0.45
RETP07949 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RETP07949 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RETP07949 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RETP07949 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RETP07949 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.88■□□□□ 0.45
RETP07949 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RETP07949 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RETP07949 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RETP07949 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RETP07949 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RETP07949 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.88■□□□□ 0.45
RETP07949 AL133373.2-201ENST00000623187 2828 ntBASIC17.88■□□□□ 0.45
RETP07949 AC020763.4-201ENST00000623414 4170 ntBASIC17.88■□□□□ 0.45
RETP07949 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RETP07949 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RETP07949 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
RETP07949 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.88■□□□□ 0.45
RETP07949 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RETP07949 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.88■□□□□ 0.45
RETP07949 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
RETP07949 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.88■□□□□ 0.45
RETP07949 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.88■□□□□ 0.45
RETP07949 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.88■□□□□ 0.45
RETP07949 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RETP07949 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.88■□□□□ 0.45
RETP07949 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RETP07949 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RETP07949 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RETP07949 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
RETP07949 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RETP07949 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
RETP07949 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RETP07949 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RETP07949 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.88■□□□□ 0.45
RETP07949 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RETP07949 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RETP07949 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RETP07949 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RETP07949 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RETP07949 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RETP07949 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
RETP07949 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RETP07949 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RETP07949 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RETP07949 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RETP07949 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.87■□□□□ 0.45
RETP07949 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.87■□□□□ 0.45
RETP07949 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.87■□□□□ 0.45
RETP07949 MTCL1P1-201ENST00000446207 792 ntBASIC17.87■□□□□ 0.45
RETP07949 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.87■□□□□ 0.45
RETP07949 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.87■□□□□ 0.45
RETP07949 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.87■□□□□ 0.45
RETP07949 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.87■□□□□ 0.45
RETP07949 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.87■□□□□ 0.45
RETP07949 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.87■□□□□ 0.45
RETP07949 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.87■□□□□ 0.45
RETP07949 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms