Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD4P01730 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.55■□□□□ 0.72
CD4P01730 HCG4B-203ENST00000450128 991 ntBASIC19.55■□□□□ 0.72
CD4P01730 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.55■□□□□ 0.72
CD4P01730 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD4P01730 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD4P01730 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD4P01730 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.55■□□□□ 0.72
CD4P01730 WIZP1-201ENST00000531444 2299 ntBASIC19.55■□□□□ 0.72
CD4P01730 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.55■□□□□ 0.72
CD4P01730 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.55■□□□□ 0.72
CD4P01730 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD4P01730 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.55■□□□□ 0.72
CD4P01730 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CD4P01730 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CD4P01730 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CD4P01730 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CD4P01730 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.54■□□□□ 0.72
CD4P01730 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CD4P01730 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CD4P01730 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CD4P01730 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.54■□□□□ 0.72
CD4P01730 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.54■□□□□ 0.72
CD4P01730 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.54■□□□□ 0.72
CD4P01730 HTR5BP-201ENST00000430851 1154 ntBASIC19.54■□□□□ 0.72
CD4P01730 VN2R19P-201ENST00000442399 1052 ntBASIC19.54■□□□□ 0.72
CD4P01730 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.54■□□□□ 0.72
CD4P01730 AC108073.2-201ENST00000464002 357 ntBASIC19.54■□□□□ 0.72
CD4P01730 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.54■□□□□ 0.72
CD4P01730 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.54■□□□□ 0.72
CD4P01730 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.54■□□□□ 0.72
CD4P01730 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CD4P01730 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CD4P01730 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CD4P01730 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CD4P01730 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CD4P01730 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.54■□□□□ 0.72
CD4P01730 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CD4P01730 ESPNP-201ENST00000270691 2015 ntBASIC19.54■□□□□ 0.72
CD4P01730 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
CD4P01730 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CD4P01730 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CD4P01730 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CD4P01730 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.54■□□□□ 0.72
CD4P01730 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.54■□□□□ 0.72
CD4P01730 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CD4P01730 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CD4P01730 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CD4P01730 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CD4P01730 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CD4P01730 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CD4P01730 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CD4P01730 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.53■□□□□ 0.72
CD4P01730 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CD4P01730 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.53■□□□□ 0.72
CD4P01730 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.53■□□□□ 0.72
CD4P01730 COX5BP2-201ENST00000392354 334 ntBASIC19.53■□□□□ 0.72
CD4P01730 AL020989.1-201ENST00000422979 469 ntBASIC19.53■□□□□ 0.72
CD4P01730 CNN2P11-201ENST00000429351 262 ntBASIC19.53■□□□□ 0.72
CD4P01730 MKNK2P1-201ENST00000437526 628 ntBASIC19.53■□□□□ 0.72
CD4P01730 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CD4P01730 IGHV3-65-201ENST00000523210 341 ntBASIC19.53■□□□□ 0.72
CD4P01730 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.53■□□□□ 0.72
CD4P01730 AC018845.2-201ENST00000568326 409 ntBASIC19.53■□□□□ 0.72
CD4P01730 AL513190.1-201ENST00000621254 727 ntBASIC19.53■□□□□ 0.72
CD4P01730 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.53■□□□□ 0.72
CD4P01730 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CD4P01730 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CD4P01730 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.53■□□□□ 0.72
CD4P01730 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CD4P01730 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.52■□□□□ 0.72
CD4P01730 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CD4P01730 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CD4P01730 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CD4P01730 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CD4P01730 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CD4P01730 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CD4P01730 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CD4P01730 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.52■□□□□ 0.72
CD4P01730 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
CD4P01730 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CD4P01730 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.52■□□□□ 0.72
CD4P01730 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CD4P01730 PRSS29P-201ENST00000440800 595 ntBASIC19.52■□□□□ 0.72
CD4P01730 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CD4P01730 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
CD4P01730 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CD4P01730 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.52■□□□□ 0.72
CD4P01730 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CD4P01730 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.52■□□□□ 0.72
CD4P01730 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.52■□□□□ 0.72
CD4P01730 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.52■□□□□ 0.72
CD4P01730 AC008667.4-201ENST00000607370 168 ntBASIC19.52■□□□□ 0.72
CD4P01730 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CD4P01730 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CD4P01730 AL353593.2-201ENST00000602529 1483 ntBASIC19.52■□□□□ 0.72
CD4P01730 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.52■□□□□ 0.72
CD4P01730 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CD4P01730 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.71
CD4P01730 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms