Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.07■□□□□ 0.64
TIMP1P01033 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.07■□□□□ 0.64
TIMP1P01033 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.07■□□□□ 0.64
TIMP1P01033 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TIMP1P01033 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TIMP1P01033 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TIMP1P01033 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TIMP1P01033 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TIMP1P01033 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
TIMP1P01033 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.07■□□□□ 0.64
TIMP1P01033 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
TIMP1P01033 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
TIMP1P01033 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
TIMP1P01033 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.07■□□□□ 0.64
TIMP1P01033 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TIMP1P01033 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TIMP1P01033 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TIMP1P01033 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.06■□□□□ 0.64
TIMP1P01033 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TIMP1P01033 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
TIMP1P01033 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TIMP1P01033 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TIMP1P01033 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TIMP1P01033 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.06■□□□□ 0.64
TIMP1P01033 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TIMP1P01033 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TIMP1P01033 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TIMP1P01033 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TIMP1P01033 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.06■□□□□ 0.64
TIMP1P01033 TIMM8BP1-201ENST00000452384 211 ntBASIC19.06■□□□□ 0.64
TIMP1P01033 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.06■□□□□ 0.64
TIMP1P01033 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TIMP1P01033 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TIMP1P01033 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TIMP1P01033 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TIMP1P01033 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TIMP1P01033 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TIMP1P01033 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TIMP1P01033 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.06■□□□□ 0.64
TIMP1P01033 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TIMP1P01033 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
TIMP1P01033 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TIMP1P01033 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TIMP1P01033 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.05■□□□□ 0.64
TIMP1P01033 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TIMP1P01033 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
TIMP1P01033 METTL26-204ENST00000397665 558 ntTSL 2 BASIC19.05■□□□□ 0.64
TIMP1P01033 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TIMP1P01033 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.05■□□□□ 0.64
TIMP1P01033 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.05■□□□□ 0.64
TIMP1P01033 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TIMP1P01033 AL513480.1-201ENST00000451731 511 ntBASIC19.05■□□□□ 0.64
TIMP1P01033 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.05■□□□□ 0.64
TIMP1P01033 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TIMP1P01033 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC19.05■□□□□ 0.64
TIMP1P01033 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TIMP1P01033 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.05■□□□□ 0.64
TIMP1P01033 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TIMP1P01033 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.05■□□□□ 0.64
TIMP1P01033 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.05■□□□□ 0.64
TIMP1P01033 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TIMP1P01033 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TIMP1P01033 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC19.05■□□□□ 0.64
TIMP1P01033 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TIMP1P01033 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.05■□□□□ 0.64
TIMP1P01033 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TIMP1P01033 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TIMP1P01033 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TIMP1P01033 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
TIMP1P01033 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.04■□□□□ 0.64
TIMP1P01033 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TIMP1P01033 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TIMP1P01033 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
TIMP1P01033 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TIMP1P01033 HLA-J-202ENST00000469281 1241 ntBASIC19.04■□□□□ 0.64
TIMP1P01033 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.04■□□□□ 0.64
TIMP1P01033 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC19.04■□□□□ 0.64
TIMP1P01033 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.04■□□□□ 0.64
TIMP1P01033 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC19.04■□□□□ 0.64
TIMP1P01033 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.04■□□□□ 0.64
TIMP1P01033 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.04■□□□□ 0.64
TIMP1P01033 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TIMP1P01033 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
TIMP1P01033 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TIMP1P01033 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TIMP1P01033 AC026120.1-201ENST00000611536 926 ntBASIC19.04■□□□□ 0.64
TIMP1P01033 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TIMP1P01033 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
TIMP1P01033 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.04■□□□□ 0.64
TIMP1P01033 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TIMP1P01033 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.04■□□□□ 0.64
TIMP1P01033 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TIMP1P01033 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TIMP1P01033 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.03■□□□□ 0.64
TIMP1P01033 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TIMP1P01033 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TIMP1P01033 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TIMP1P01033 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TIMP1P01033 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TIMP1P01033 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms