Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MBD3O95983 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC20.37■□□□□ 0.85
MBD3O95983 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MBD3O95983 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.37■□□□□ 0.85
MBD3O95983 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.37■□□□□ 0.85
MBD3O95983 AC116562.2-201ENST00000507042 360 ntBASIC20.37■□□□□ 0.85
MBD3O95983 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.37■□□□□ 0.85
MBD3O95983 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MBD3O95983 AC073648.6-201ENST00000641589 218 ntBASIC20.37■□□□□ 0.85
MBD3O95983 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MBD3O95983 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MBD3O95983 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MBD3O95983 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
MBD3O95983 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.37■□□□□ 0.85
MBD3O95983 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MBD3O95983 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MBD3O95983 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC20.37■□□□□ 0.85
MBD3O95983 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MBD3O95983 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MBD3O95983 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
MBD3O95983 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
MBD3O95983 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MBD3O95983 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC20.37■□□□□ 0.85
MBD3O95983 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC20.36■□□□□ 0.85
MBD3O95983 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
MBD3O95983 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
MBD3O95983 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
MBD3O95983 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
MBD3O95983 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
MBD3O95983 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
MBD3O95983 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
MBD3O95983 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.36■□□□□ 0.85
MBD3O95983 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
MBD3O95983 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.36■□□□□ 0.85
MBD3O95983 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC20.36■□□□□ 0.85
MBD3O95983 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.36■□□□□ 0.85
MBD3O95983 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MBD3O95983 AL355802.2-201ENST00000402069 882 ntBASIC20.36■□□□□ 0.85
MBD3O95983 FAM197Y1-201ENST00000421178 764 ntBASIC20.36■□□□□ 0.85
MBD3O95983 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MBD3O95983 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.36■□□□□ 0.85
MBD3O95983 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.36■□□□□ 0.85
MBD3O95983 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
MBD3O95983 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.36■□□□□ 0.85
MBD3O95983 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.36■□□□□ 0.85
MBD3O95983 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
MBD3O95983 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.36■□□□□ 0.85
MBD3O95983 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
MBD3O95983 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC20.36■□□□□ 0.85
MBD3O95983 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.36■□□□□ 0.85
MBD3O95983 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC20.36■□□□□ 0.85
MBD3O95983 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
MBD3O95983 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC20.36■□□□□ 0.85
MBD3O95983 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MBD3O95983 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MBD3O95983 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
MBD3O95983 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MBD3O95983 RHBDF1P1-201ENST00000427504 1941 ntBASIC20.35■□□□□ 0.85
MBD3O95983 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MBD3O95983 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MBD3O95983 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.35■□□□□ 0.85
MBD3O95983 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MBD3O95983 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MBD3O95983 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
MBD3O95983 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MBD3O95983 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
MBD3O95983 CA12-203ENST00000422263 2556 ntTSL 2 BASIC20.35■□□□□ 0.85
MBD3O95983 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
MBD3O95983 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MBD3O95983 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
MBD3O95983 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
MBD3O95983 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MBD3O95983 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.35■□□□□ 0.85
MBD3O95983 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.35■□□□□ 0.85
MBD3O95983 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.35■□□□□ 0.85
MBD3O95983 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.35■□□□□ 0.85
MBD3O95983 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.35■□□□□ 0.85
MBD3O95983 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.35■□□□□ 0.85
MBD3O95983 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.35■□□□□ 0.85
MBD3O95983 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.35■□□□□ 0.85
MBD3O95983 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.35■□□□□ 0.85
MBD3O95983 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
MBD3O95983 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
MBD3O95983 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC20.35■□□□□ 0.85
MBD3O95983 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
MBD3O95983 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
MBD3O95983 AL603756.1-201ENST00000606511 2163 ntBASIC20.35■□□□□ 0.85
MBD3O95983 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
MBD3O95983 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
MBD3O95983 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MBD3O95983 AC116353.5-201ENST00000638148 1699 ntBASIC20.35■□□□□ 0.85
MBD3O95983 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.35■□□□□ 0.85
MBD3O95983 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
MBD3O95983 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MBD3O95983 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.35■□□□□ 0.85
MBD3O95983 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
MBD3O95983 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC20.34■□□□□ 0.85
MBD3O95983 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
MBD3O95983 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MBD3O95983 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms