Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GGPS1O95749 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
GGPS1O95749 AC004817.3-201ENST00000602957 2129 ntBASIC19.9■□□□□ 0.78
GGPS1O95749 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.9■□□□□ 0.78
GGPS1O95749 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GGPS1O95749 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GGPS1O95749 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GGPS1O95749 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
GGPS1O95749 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
GGPS1O95749 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.9■□□□□ 0.78
GGPS1O95749 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
GGPS1O95749 POLD2P1-201ENST00000511220 997 ntBASIC19.9■□□□□ 0.78
GGPS1O95749 IGHV3-22-201ENST00000520721 359 ntBASIC19.9■□□□□ 0.78
GGPS1O95749 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.9■□□□□ 0.78
GGPS1O95749 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
GGPS1O95749 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GGPS1O95749 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.9■□□□□ 0.78
GGPS1O95749 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
GGPS1O95749 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GGPS1O95749 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GGPS1O95749 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
GGPS1O95749 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
GGPS1O95749 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GGPS1O95749 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
GGPS1O95749 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
GGPS1O95749 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GGPS1O95749 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GGPS1O95749 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
GGPS1O95749 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
GGPS1O95749 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.89■□□□□ 0.77
GGPS1O95749 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.89■□□□□ 0.77
GGPS1O95749 ZNF259P1-201ENST00000407656 1365 ntBASIC19.89■□□□□ 0.77
GGPS1O95749 AC098831.1-202ENST00000438821 336 ntBASIC19.89■□□□□ 0.77
GGPS1O95749 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.89■□□□□ 0.77
GGPS1O95749 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.89■□□□□ 0.77
GGPS1O95749 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.89■□□□□ 0.77
GGPS1O95749 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.89■□□□□ 0.77
GGPS1O95749 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.89■□□□□ 0.77
GGPS1O95749 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.89■□□□□ 0.77
GGPS1O95749 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.89■□□□□ 0.77
GGPS1O95749 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
GGPS1O95749 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.89■□□□□ 0.77
GGPS1O95749 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.89■□□□□ 0.77
GGPS1O95749 AC073592.4-201ENST00000623827 446 ntBASIC19.89■□□□□ 0.77
GGPS1O95749 AC073592.5-201ENST00000624854 528 ntBASIC19.89■□□□□ 0.77
GGPS1O95749 AL022326.1-202ENST00000641533 845 ntBASIC19.89■□□□□ 0.77
GGPS1O95749 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.89■□□□□ 0.77
GGPS1O95749 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
GGPS1O95749 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
GGPS1O95749 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.88■□□□□ 0.77
GGPS1O95749 REXO1L9P-201ENST00000604264 2108 ntBASIC19.88■□□□□ 0.77
GGPS1O95749 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GGPS1O95749 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GGPS1O95749 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GGPS1O95749 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GGPS1O95749 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.88■□□□□ 0.77
GGPS1O95749 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
GGPS1O95749 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
GGPS1O95749 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
GGPS1O95749 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
GGPS1O95749 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
GGPS1O95749 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GGPS1O95749 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
GGPS1O95749 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
GGPS1O95749 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
GGPS1O95749 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
GGPS1O95749 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.88■□□□□ 0.77
GGPS1O95749 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.88■□□□□ 0.77
GGPS1O95749 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.88■□□□□ 0.77
GGPS1O95749 MIR940-201ENST00000401276 94 ntBASIC19.88■□□□□ 0.77
GGPS1O95749 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
GGPS1O95749 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.88■□□□□ 0.77
GGPS1O95749 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.88■□□□□ 0.77
GGPS1O95749 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.88■□□□□ 0.77
GGPS1O95749 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.88■□□□□ 0.77
GGPS1O95749 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
GGPS1O95749 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
GGPS1O95749 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GGPS1O95749 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
GGPS1O95749 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
GGPS1O95749 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
GGPS1O95749 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.88■□□□□ 0.77
GGPS1O95749 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GGPS1O95749 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
GGPS1O95749 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.88■□□□□ 0.77
GGPS1O95749 AL354751.1-201ENST00000412768 1863 ntBASIC19.88■□□□□ 0.77
GGPS1O95749 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GGPS1O95749 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GGPS1O95749 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GGPS1O95749 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.88■□□□□ 0.77
GGPS1O95749 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GGPS1O95749 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GGPS1O95749 AC104109.2-201ENST00000602919 1418 ntBASIC19.87■□□□□ 0.77
GGPS1O95749 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.87■□□□□ 0.77
GGPS1O95749 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GGPS1O95749 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.87■□□□□ 0.77
GGPS1O95749 AC007613.1-201ENST00000572811 2597 ntBASIC19.87■□□□□ 0.77
GGPS1O95749 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GGPS1O95749 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GGPS1O95749 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms