Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 AC068472.1-201ENST00000474589 881 ntBASIC17.45■□□□□ 0.38
CPNE6O95741 AC079776.4-201ENST00000511039 504 ntBASIC17.45■□□□□ 0.38
CPNE6O95741 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.45■□□□□ 0.38
CPNE6O95741 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.45■□□□□ 0.38
CPNE6O95741 AC009154.2-201ENST00000621177 724 ntBASIC17.45■□□□□ 0.38
CPNE6O95741 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE6O95741 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE6O95741 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CPNE6O95741 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE6O95741 AC124067.4-201ENST00000519691 2379 ntBASIC17.45■□□□□ 0.38
CPNE6O95741 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE6O95741 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.45■□□□□ 0.38
CPNE6O95741 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.45■□□□□ 0.38
CPNE6O95741 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE6O95741 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE6O95741 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.45■□□□□ 0.38
CPNE6O95741 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE6O95741 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.45■□□□□ 0.38
CPNE6O95741 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE6O95741 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CPNE6O95741 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE6O95741 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CPNE6O95741 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CPNE6O95741 GNAS-203ENST00000306120 1878 ntBASIC17.44■□□□□ 0.38
CPNE6O95741 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CPNE6O95741 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE6O95741 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE6O95741 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE6O95741 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE6O95741 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE6O95741 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE6O95741 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE6O95741 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE6O95741 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE6O95741 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE6O95741 AL022342.1-201ENST00000400363 863 ntBASIC17.44■□□□□ 0.38
CPNE6O95741 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.44■□□□□ 0.38
CPNE6O95741 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
CPNE6O95741 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.44■□□□□ 0.38
CPNE6O95741 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CPNE6O95741 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE6O95741 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CPNE6O95741 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.44■□□□□ 0.38
CPNE6O95741 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE6O95741 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.44■□□□□ 0.38
CPNE6O95741 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.43■□□□□ 0.38
CPNE6O95741 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CPNE6O95741 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE6O95741 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.43■□□□□ 0.38
CPNE6O95741 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE6O95741 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE6O95741 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.43■□□□□ 0.38
CPNE6O95741 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.43■□□□□ 0.38
CPNE6O95741 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE6O95741 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.43■□□□□ 0.38
CPNE6O95741 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE6O95741 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE6O95741 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE6O95741 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE6O95741 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
CPNE6O95741 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE6O95741 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
CPNE6O95741 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.43■□□□□ 0.38
CPNE6O95741 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.43■□□□□ 0.38
CPNE6O95741 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.43■□□□□ 0.38
CPNE6O95741 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.43■□□□□ 0.38
CPNE6O95741 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CPNE6O95741 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.43■□□□□ 0.38
CPNE6O95741 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.43■□□□□ 0.38
CPNE6O95741 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.43■□□□□ 0.38
CPNE6O95741 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE6O95741 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE6O95741 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE6O95741 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE6O95741 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE6O95741 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE6O95741 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE6O95741 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE6O95741 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.43■□□□□ 0.38
CPNE6O95741 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE6O95741 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE6O95741 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE6O95741 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.43■□□□□ 0.38
CPNE6O95741 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE6O95741 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE6O95741 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE6O95741 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE6O95741 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE6O95741 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE6O95741 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE6O95741 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.42■□□□□ 0.38
CPNE6O95741 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.42■□□□□ 0.38
CPNE6O95741 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
CPNE6O95741 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE6O95741 AL499627.1-201ENST00000569373 2188 ntBASIC17.42■□□□□ 0.38
CPNE6O95741 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE6O95741 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE6O95741 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.42■□□□□ 0.38
CPNE6O95741 TNRC18P3-201ENST00000441896 2691 ntBASIC17.42■□□□□ 0.38
CPNE6O95741 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms