Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLSTN1O94985 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.7■□□□□ 0.74
CLSTN1O94985 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.7■□□□□ 0.74
CLSTN1O94985 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC19.7■□□□□ 0.74
CLSTN1O94985 AL391807.1-203ENST00000604392 2365 ntBASIC19.7■□□□□ 0.74
CLSTN1O94985 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLSTN1O94985 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.7■□□□□ 0.74
CLSTN1O94985 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CLSTN1O94985 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CLSTN1O94985 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLSTN1O94985 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLSTN1O94985 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLSTN1O94985 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLSTN1O94985 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLSTN1O94985 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLSTN1O94985 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.69■□□□□ 0.74
CLSTN1O94985 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC19.69■□□□□ 0.74
CLSTN1O94985 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLSTN1O94985 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLSTN1O94985 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLSTN1O94985 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLSTN1O94985 PVRIG2P-201ENST00000435460 978 ntBASIC19.69■□□□□ 0.74
CLSTN1O94985 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
CLSTN1O94985 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLSTN1O94985 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.69■□□□□ 0.74
CLSTN1O94985 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.69■□□□□ 0.74
CLSTN1O94985 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.69■□□□□ 0.74
CLSTN1O94985 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLSTN1O94985 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.69■□□□□ 0.74
CLSTN1O94985 AC135776.1-201ENST00000319817 2481 ntBASIC19.69■□□□□ 0.74
CLSTN1O94985 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLSTN1O94985 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLSTN1O94985 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLSTN1O94985 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLSTN1O94985 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLSTN1O94985 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
CLSTN1O94985 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CLSTN1O94985 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLSTN1O94985 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CLSTN1O94985 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLSTN1O94985 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLSTN1O94985 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CLSTN1O94985 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLSTN1O94985 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CLSTN1O94985 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLSTN1O94985 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.68■□□□□ 0.74
CLSTN1O94985 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLSTN1O94985 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.68■□□□□ 0.74
CLSTN1O94985 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLSTN1O94985 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLSTN1O94985 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLSTN1O94985 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLSTN1O94985 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CLSTN1O94985 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLSTN1O94985 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLSTN1O94985 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLSTN1O94985 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.68■□□□□ 0.74
CLSTN1O94985 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.68■□□□□ 0.74
CLSTN1O94985 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.68■□□□□ 0.74
CLSTN1O94985 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.68■□□□□ 0.74
CLSTN1O94985 VENTXP5-201ENST00000523979 775 ntBASIC19.68■□□□□ 0.74
CLSTN1O94985 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CLSTN1O94985 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLSTN1O94985 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.68■□□□□ 0.74
CLSTN1O94985 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLSTN1O94985 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLSTN1O94985 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLSTN1O94985 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLSTN1O94985 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.68■□□□□ 0.74
CLSTN1O94985 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLSTN1O94985 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLSTN1O94985 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLSTN1O94985 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLSTN1O94985 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLSTN1O94985 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CLSTN1O94985 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLSTN1O94985 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLSTN1O94985 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLSTN1O94985 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLSTN1O94985 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLSTN1O94985 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.67■□□□□ 0.74
CLSTN1O94985 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.67■□□□□ 0.74
CLSTN1O94985 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.67■□□□□ 0.74
CLSTN1O94985 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.67■□□□□ 0.74
CLSTN1O94985 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.67■□□□□ 0.74
CLSTN1O94985 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.67■□□□□ 0.74
CLSTN1O94985 AC079602.3-201ENST00000623931 403 ntBASIC19.67■□□□□ 0.74
CLSTN1O94985 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.67■□□□□ 0.74
CLSTN1O94985 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLSTN1O94985 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CLSTN1O94985 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLSTN1O94985 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.67■□□□□ 0.74
CLSTN1O94985 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLSTN1O94985 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CLSTN1O94985 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLSTN1O94985 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLSTN1O94985 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CLSTN1O94985 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLSTN1O94985 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLSTN1O94985 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms