Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.56■□□□□ 0.56
OPHN1O60890 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.56■□□□□ 0.56
OPHN1O60890 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
OPHN1O60890 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.56■□□□□ 0.56
OPHN1O60890 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.56■□□□□ 0.56
OPHN1O60890 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
OPHN1O60890 LINC01711-201ENST00000598340 967 ntBASIC18.56■□□□□ 0.56
OPHN1O60890 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
OPHN1O60890 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.56■□□□□ 0.56
OPHN1O60890 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
OPHN1O60890 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
OPHN1O60890 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
OPHN1O60890 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.56■□□□□ 0.56
OPHN1O60890 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
OPHN1O60890 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
OPHN1O60890 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.56■□□□□ 0.56
OPHN1O60890 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.56■□□□□ 0.56
OPHN1O60890 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
OPHN1O60890 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
OPHN1O60890 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.56■□□□□ 0.56
OPHN1O60890 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
OPHN1O60890 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
OPHN1O60890 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.55■□□□□ 0.56
OPHN1O60890 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
OPHN1O60890 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
OPHN1O60890 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
OPHN1O60890 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
OPHN1O60890 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
OPHN1O60890 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.55■□□□□ 0.56
OPHN1O60890 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
OPHN1O60890 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
OPHN1O60890 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
OPHN1O60890 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
OPHN1O60890 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
OPHN1O60890 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
OPHN1O60890 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.55■□□□□ 0.56
OPHN1O60890 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
OPHN1O60890 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.55■□□□□ 0.56
OPHN1O60890 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
OPHN1O60890 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
OPHN1O60890 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
OPHN1O60890 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
OPHN1O60890 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.55■□□□□ 0.56
OPHN1O60890 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
OPHN1O60890 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
OPHN1O60890 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
OPHN1O60890 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
OPHN1O60890 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
OPHN1O60890 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
OPHN1O60890 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.55■□□□□ 0.56
OPHN1O60890 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
OPHN1O60890 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
OPHN1O60890 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
OPHN1O60890 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
OPHN1O60890 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
OPHN1O60890 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
OPHN1O60890 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
OPHN1O60890 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
OPHN1O60890 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
OPHN1O60890 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
OPHN1O60890 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
OPHN1O60890 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
OPHN1O60890 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
OPHN1O60890 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
OPHN1O60890 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.54■□□□□ 0.56
OPHN1O60890 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
OPHN1O60890 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
OPHN1O60890 CHCHD2P8-201ENST00000429873 447 ntBASIC18.54■□□□□ 0.56
OPHN1O60890 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.54■□□□□ 0.56
OPHN1O60890 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
OPHN1O60890 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.54■□□□□ 0.56
OPHN1O60890 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
OPHN1O60890 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.54■□□□□ 0.56
OPHN1O60890 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.54■□□□□ 0.56
OPHN1O60890 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.54■□□□□ 0.56
OPHN1O60890 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
OPHN1O60890 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.54■□□□□ 0.56
OPHN1O60890 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
OPHN1O60890 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
OPHN1O60890 AC134043.2-201ENST00000624206 2238 ntBASIC18.54■□□□□ 0.56
OPHN1O60890 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.54■□□□□ 0.56
OPHN1O60890 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
OPHN1O60890 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
OPHN1O60890 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
OPHN1O60890 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
OPHN1O60890 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.54■□□□□ 0.56
OPHN1O60890 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
OPHN1O60890 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
OPHN1O60890 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.54■□□□□ 0.56
OPHN1O60890 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
OPHN1O60890 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.54■□□□□ 0.56
OPHN1O60890 KRT18P1-202ENST00000452408 1331 ntBASIC18.53■□□□□ 0.56
OPHN1O60890 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.53■□□□□ 0.56
OPHN1O60890 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
OPHN1O60890 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
OPHN1O60890 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.53■□□□□ 0.56
OPHN1O60890 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
OPHN1O60890 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
OPHN1O60890 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
OPHN1O60890 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms