Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM13O60858 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM13O60858 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM13O60858 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM13O60858 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM13O60858 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM13O60858 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
TRIM13O60858 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.51■□□□□ 0.39
TRIM13O60858 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.51■□□□□ 0.39
TRIM13O60858 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.51■□□□□ 0.39
TRIM13O60858 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
TRIM13O60858 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM13O60858 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM13O60858 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.51■□□□□ 0.39
TRIM13O60858 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TRIM13O60858 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM13O60858 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM13O60858 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.51■□□□□ 0.39
TRIM13O60858 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM13O60858 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.51■□□□□ 0.39
TRIM13O60858 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM13O60858 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
TRIM13O60858 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TRIM13O60858 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TRIM13O60858 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM13O60858 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM13O60858 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TRIM13O60858 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM13O60858 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM13O60858 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM13O60858 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM13O60858 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM13O60858 INGX-201ENST00000359239 846 ntBASIC17.5■□□□□ 0.39
TRIM13O60858 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
TRIM13O60858 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TRIM13O60858 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM13O60858 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM13O60858 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.5■□□□□ 0.39
TRIM13O60858 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.5■□□□□ 0.39
TRIM13O60858 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.5■□□□□ 0.39
TRIM13O60858 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM13O60858 AL512604.3-201ENST00000569583 964 ntBASIC17.5■□□□□ 0.39
TRIM13O60858 NEK4P2-201ENST00000580004 1012 ntBASIC17.5■□□□□ 0.39
TRIM13O60858 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM13O60858 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM13O60858 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.5■□□□□ 0.39
TRIM13O60858 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM13O60858 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM13O60858 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM13O60858 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
TRIM13O60858 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.5■□□□□ 0.39
TRIM13O60858 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM13O60858 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM13O60858 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM13O60858 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM13O60858 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.49■□□□□ 0.39
TRIM13O60858 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM13O60858 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM13O60858 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM13O60858 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM13O60858 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM13O60858 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
TRIM13O60858 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.49■□□□□ 0.39
TRIM13O60858 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM13O60858 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM13O60858 MIR718-201ENST00000390190 70 ntBASIC17.49■□□□□ 0.39
TRIM13O60858 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
TRIM13O60858 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.49■□□□□ 0.39
TRIM13O60858 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.49■□□□□ 0.39
TRIM13O60858 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
TRIM13O60858 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.49■□□□□ 0.39
TRIM13O60858 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
TRIM13O60858 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM13O60858 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.49■□□□□ 0.39
TRIM13O60858 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM13O60858 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.49■□□□□ 0.39
TRIM13O60858 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM13O60858 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM13O60858 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TRIM13O60858 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.49■□□□□ 0.39
TRIM13O60858 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM13O60858 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
TRIM13O60858 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM13O60858 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM13O60858 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM13O60858 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM13O60858 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM13O60858 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.48■□□□□ 0.39
TRIM13O60858 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM13O60858 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM13O60858 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.48■□□□□ 0.39
TRIM13O60858 KRT18P65-201ENST00000439811 1286 ntBASIC17.48■□□□□ 0.39
TRIM13O60858 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.48■□□□□ 0.39
TRIM13O60858 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.48■□□□□ 0.39
TRIM13O60858 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.48■□□□□ 0.39
TRIM13O60858 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
TRIM13O60858 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM13O60858 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.48■□□□□ 0.39
TRIM13O60858 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.48■□□□□ 0.39
TRIM13O60858 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms