Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KLHL41O60662 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KLHL41O60662 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
KLHL41O60662 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KLHL41O60662 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
KLHL41O60662 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KLHL41O60662 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
KLHL41O60662 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KLHL41O60662 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.67■□□□□ 0.42
KLHL41O60662 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.67■□□□□ 0.42
KLHL41O60662 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
KLHL41O60662 TNRC18P3-201ENST00000441896 2691 ntBASIC17.67■□□□□ 0.42
KLHL41O60662 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
KLHL41O60662 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.67■□□□□ 0.42
KLHL41O60662 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
KLHL41O60662 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.67■□□□□ 0.42
KLHL41O60662 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KLHL41O60662 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
KLHL41O60662 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
KLHL41O60662 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
KLHL41O60662 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
KLHL41O60662 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.67■□□□□ 0.42
KLHL41O60662 AP003041.3-201ENST00000527151 707 ntBASIC17.67■□□□□ 0.42
KLHL41O60662 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.67■□□□□ 0.42
KLHL41O60662 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.67■□□□□ 0.42
KLHL41O60662 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.67■□□□□ 0.42
KLHL41O60662 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.67■□□□□ 0.42
KLHL41O60662 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
KLHL41O60662 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.67■□□□□ 0.42
KLHL41O60662 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
KLHL41O60662 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
KLHL41O60662 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
KLHL41O60662 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KLHL41O60662 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
KLHL41O60662 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KLHL41O60662 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
KLHL41O60662 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
KLHL41O60662 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
KLHL41O60662 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.66■□□□□ 0.42
KLHL41O60662 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
KLHL41O60662 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
KLHL41O60662 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
KLHL41O60662 AC093010.1-201ENST00000473625 1624 ntBASIC17.66■□□□□ 0.42
KLHL41O60662 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KLHL41O60662 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.66■□□□□ 0.42
KLHL41O60662 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.66■□□□□ 0.42
KLHL41O60662 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.66■□□□□ 0.42
KLHL41O60662 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KLHL41O60662 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.66■□□□□ 0.42
KLHL41O60662 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.66■□□□□ 0.42
KLHL41O60662 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.66■□□□□ 0.42
KLHL41O60662 AC009102.3-201ENST00000623118 1491 ntBASIC17.66■□□□□ 0.42
KLHL41O60662 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KLHL41O60662 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.66■□□□□ 0.42
KLHL41O60662 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KLHL41O60662 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KLHL41O60662 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KLHL41O60662 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.66■□□□□ 0.42
KLHL41O60662 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KLHL41O60662 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
KLHL41O60662 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.66■□□□□ 0.42
KLHL41O60662 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KLHL41O60662 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
KLHL41O60662 AL355312.1-201ENST00000407115 2176 ntBASIC17.66■□□□□ 0.42
KLHL41O60662 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.66■□□□□ 0.42
KLHL41O60662 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KLHL41O60662 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KLHL41O60662 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
KLHL41O60662 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
KLHL41O60662 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
KLHL41O60662 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
KLHL41O60662 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KLHL41O60662 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KLHL41O60662 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KLHL41O60662 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.65■□□□□ 0.42
KLHL41O60662 NKILA-202ENST00000614771 2598 ntBASIC17.65■□□□□ 0.42
KLHL41O60662 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KLHL41O60662 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.65■□□□□ 0.42
KLHL41O60662 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
KLHL41O60662 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KLHL41O60662 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KLHL41O60662 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.65■□□□□ 0.42
KLHL41O60662 AL671277.2-201ENST00000458060 996 ntBASIC17.65■□□□□ 0.42
KLHL41O60662 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.65■□□□□ 0.42
KLHL41O60662 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.65■□□□□ 0.42
KLHL41O60662 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.65■□□□□ 0.42
KLHL41O60662 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.65■□□□□ 0.42
KLHL41O60662 AC011676.5-201ENST00000624864 2660 ntBASIC17.65■□□□□ 0.42
KLHL41O60662 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KLHL41O60662 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
KLHL41O60662 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.65■□□□□ 0.42
KLHL41O60662 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KLHL41O60662 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KLHL41O60662 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.65■□□□□ 0.42
KLHL41O60662 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
KLHL41O60662 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KLHL41O60662 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.65■□□□□ 0.42
KLHL41O60662 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
KLHL41O60662 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
KLHL41O60662 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms