Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHGA12O60330 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHGA12O60330 AL356309.3-201ENST00000624132 1934 ntBASIC17.61■□□□□ 0.41
PCDHGA12O60330 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA12O60330 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA12O60330 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA12O60330 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA12O60330 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA12O60330 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHGA12O60330 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHGA12O60330 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA12O60330 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHGA12O60330 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHGA12O60330 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.61■□□□□ 0.41
PCDHGA12O60330 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHGA12O60330 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHGA12O60330 AL139288.1-201ENST00000623748 933 ntBASIC17.61■□□□□ 0.41
PCDHGA12O60330 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHGA12O60330 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PCDHGA12O60330 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA12O60330 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA12O60330 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA12O60330 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHGA12O60330 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PCDHGA12O60330 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA12O60330 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PCDHGA12O60330 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA12O60330 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA12O60330 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA12O60330 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PCDHGA12O60330 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PCDHGA12O60330 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA12O60330 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
PCDHGA12O60330 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA12O60330 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA12O60330 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA12O60330 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA12O60330 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA12O60330 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA12O60330 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.6■□□□□ 0.41
PCDHGA12O60330 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.6■□□□□ 0.41
PCDHGA12O60330 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
PCDHGA12O60330 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.6■□□□□ 0.41
PCDHGA12O60330 RPS2P1-201ENST00000434010 821 ntBASIC17.6■□□□□ 0.41
PCDHGA12O60330 KRT18P65-201ENST00000439811 1286 ntBASIC17.6■□□□□ 0.41
PCDHGA12O60330 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHGA12O60330 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA12O60330 OR7E14P-202ENST00000530490 1290 ntBASIC17.6■□□□□ 0.41
PCDHGA12O60330 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHGA12O60330 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHGA12O60330 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHGA12O60330 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA12O60330 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA12O60330 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA12O60330 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA12O60330 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PCDHGA12O60330 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA12O60330 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA12O60330 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PCDHGA12O60330 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA12O60330 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA12O60330 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA12O60330 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
PCDHGA12O60330 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA12O60330 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHGA12O60330 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHGA12O60330 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.59■□□□□ 0.41
PCDHGA12O60330 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA12O60330 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA12O60330 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA12O60330 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA12O60330 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA12O60330 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.59■□□□□ 0.41
PCDHGA12O60330 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA12O60330 MED15P5-201ENST00000423150 992 ntBASIC17.59■□□□□ 0.41
PCDHGA12O60330 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.59■□□□□ 0.41
PCDHGA12O60330 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.59■□□□□ 0.41
PCDHGA12O60330 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.59■□□□□ 0.41
PCDHGA12O60330 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHGA12O60330 AC140113.2-201ENST00000604370 208 ntBASIC17.59■□□□□ 0.41
PCDHGA12O60330 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA12O60330 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA12O60330 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA12O60330 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.59■□□□□ 0.41
PCDHGA12O60330 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PCDHGA12O60330 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHGA12O60330 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHGA12O60330 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHGA12O60330 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
PCDHGA12O60330 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGA12O60330 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGA12O60330 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGA12O60330 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGA12O60330 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
PCDHGA12O60330 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGA12O60330 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGA12O60330 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.58■□□□□ 0.41
PCDHGA12O60330 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.58■□□□□ 0.41
PCDHGA12O60330 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.58■□□□□ 0.41
PCDHGA12O60330 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms