Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
IDH3BO43837 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
IDH3BO43837 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.36■□□□□ 0.21
IDH3BO43837 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
IDH3BO43837 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
IDH3BO43837 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
IDH3BO43837 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
IDH3BO43837 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.36■□□□□ 0.21
IDH3BO43837 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IDH3BO43837 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
IDH3BO43837 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
IDH3BO43837 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
IDH3BO43837 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
IDH3BO43837 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IDH3BO43837 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.35■□□□□ 0.21
IDH3BO43837 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
IDH3BO43837 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
IDH3BO43837 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.35■□□□□ 0.21
IDH3BO43837 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
IDH3BO43837 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
IDH3BO43837 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
IDH3BO43837 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IDH3BO43837 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
IDH3BO43837 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
IDH3BO43837 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IDH3BO43837 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IDH3BO43837 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IDH3BO43837 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IDH3BO43837 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IDH3BO43837 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IDH3BO43837 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IDH3BO43837 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.35■□□□□ 0.21
IDH3BO43837 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.35■□□□□ 0.21
IDH3BO43837 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IDH3BO43837 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.35■□□□□ 0.21
IDH3BO43837 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
IDH3BO43837 C2orf69P3-201ENST00000565542 1120 ntBASIC16.35■□□□□ 0.21
IDH3BO43837 AC010653.2-201ENST00000623505 997 ntBASIC16.35■□□□□ 0.21
IDH3BO43837 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IDH3BO43837 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
IDH3BO43837 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.35■□□□□ 0.21
IDH3BO43837 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IDH3BO43837 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.35■□□□□ 0.21
IDH3BO43837 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IDH3BO43837 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
IDH3BO43837 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IDH3BO43837 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IDH3BO43837 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.35■□□□□ 0.21
IDH3BO43837 PCDH8P1-201ENST00000428983 2773 ntBASIC16.35■□□□□ 0.21
IDH3BO43837 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
IDH3BO43837 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IDH3BO43837 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
IDH3BO43837 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IDH3BO43837 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IDH3BO43837 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IDH3BO43837 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.34■□□□□ 0.21
IDH3BO43837 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
IDH3BO43837 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
IDH3BO43837 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
IDH3BO43837 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.34■□□□□ 0.21
IDH3BO43837 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IDH3BO43837 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.34■□□□□ 0.21
IDH3BO43837 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.34■□□□□ 0.21
IDH3BO43837 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IDH3BO43837 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IDH3BO43837 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
IDH3BO43837 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
IDH3BO43837 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
IDH3BO43837 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.34■□□□□ 0.21
IDH3BO43837 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.34■□□□□ 0.21
IDH3BO43837 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.34■□□□□ 0.21
IDH3BO43837 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.34■□□□□ 0.21
IDH3BO43837 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
IDH3BO43837 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
IDH3BO43837 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
IDH3BO43837 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.34■□□□□ 0.21
IDH3BO43837 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
IDH3BO43837 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.34■□□□□ 0.21
IDH3BO43837 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
IDH3BO43837 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IDH3BO43837 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IDH3BO43837 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.34■□□□□ 0.21
IDH3BO43837 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
IDH3BO43837 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IDH3BO43837 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.33■□□□□ 0.21
IDH3BO43837 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
IDH3BO43837 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
IDH3BO43837 AC103702.1-201ENST00000548801 2630 ntBASIC16.33■□□□□ 0.21
IDH3BO43837 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
IDH3BO43837 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
IDH3BO43837 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
IDH3BO43837 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
IDH3BO43837 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.33■□□□□ 0.21
IDH3BO43837 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
IDH3BO43837 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
IDH3BO43837 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
IDH3BO43837 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
IDH3BO43837 AC108860.2-201ENST00000562760 2183 ntBASIC16.33■□□□□ 0.2
IDH3BO43837 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.33■□□□□ 0.2
IDH3BO43837 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms