Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP2AO43633 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.99■□□□□ 0.79
CHMP2AO43633 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CHMP2AO43633 INTS4P1-201ENST00000438455 1935 ntBASIC19.99■□□□□ 0.79
CHMP2AO43633 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP2AO43633 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.99■□□□□ 0.79
CHMP2AO43633 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP2AO43633 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
CHMP2AO43633 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP2AO43633 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP2AO43633 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP2AO43633 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.99■□□□□ 0.79
CHMP2AO43633 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CHMP2AO43633 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP2AO43633 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP2AO43633 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP2AO43633 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP2AO43633 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP2AO43633 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.98■□□□□ 0.79
CHMP2AO43633 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.98■□□□□ 0.79
CHMP2AO43633 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP2AO43633 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.98■□□□□ 0.79
CHMP2AO43633 AC004870.1-201ENST00000315132 882 ntBASIC19.98■□□□□ 0.79
CHMP2AO43633 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.98■□□□□ 0.79
CHMP2AO43633 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP2AO43633 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.98■□□□□ 0.79
CHMP2AO43633 AC096633.1-201ENST00000422446 749 ntBASIC19.98■□□□□ 0.79
CHMP2AO43633 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.98■□□□□ 0.79
CHMP2AO43633 TPM4P1-201ENST00000436100 807 ntBASIC19.98■□□□□ 0.79
CHMP2AO43633 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.98■□□□□ 0.79
CHMP2AO43633 AC132008.2-207ENST00000454517 770 ntBASIC19.98■□□□□ 0.79
CHMP2AO43633 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.98■□□□□ 0.79
CHMP2AO43633 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.98■□□□□ 0.79
CHMP2AO43633 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.98■□□□□ 0.79
CHMP2AO43633 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.98■□□□□ 0.79
CHMP2AO43633 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.98■□□□□ 0.79
CHMP2AO43633 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.98■□□□□ 0.79
CHMP2AO43633 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CHMP2AO43633 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.98■□□□□ 0.79
CHMP2AO43633 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP2AO43633 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.98■□□□□ 0.79
CHMP2AO43633 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP2AO43633 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.98■□□□□ 0.79
CHMP2AO43633 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP2AO43633 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP2AO43633 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CHMP2AO43633 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CHMP2AO43633 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP2AO43633 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP2AO43633 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP2AO43633 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP2AO43633 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP2AO43633 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP2AO43633 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP2AO43633 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP2AO43633 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP2AO43633 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.97■□□□□ 0.79
CHMP2AO43633 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP2AO43633 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP2AO43633 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP2AO43633 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.97■□□□□ 0.79
CHMP2AO43633 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP2AO43633 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP2AO43633 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP2AO43633 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP2AO43633 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.97■□□□□ 0.79
CHMP2AO43633 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.97■□□□□ 0.79
CHMP2AO43633 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.97■□□□□ 0.79
CHMP2AO43633 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CHMP2AO43633 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP2AO43633 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP2AO43633 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP2AO43633 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.97■□□□□ 0.79
CHMP2AO43633 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP2AO43633 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.97■□□□□ 0.79
CHMP2AO43633 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP2AO43633 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.97■□□□□ 0.79
CHMP2AO43633 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP2AO43633 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP2AO43633 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP2AO43633 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.97■□□□□ 0.79
CHMP2AO43633 KRT18P55-202ENST00000578578 1546 ntBASIC19.97■□□□□ 0.79
CHMP2AO43633 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP2AO43633 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP2AO43633 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.96■□□□□ 0.79
CHMP2AO43633 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.96■□□□□ 0.79
CHMP2AO43633 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP2AO43633 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
CHMP2AO43633 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP2AO43633 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP2AO43633 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CHMP2AO43633 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
CHMP2AO43633 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP2AO43633 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP2AO43633 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.96■□□□□ 0.79
CHMP2AO43633 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP2AO43633 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP2AO43633 FAM220CP-201ENST00000395253 831 ntBASIC19.96■□□□□ 0.79
CHMP2AO43633 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.96■□□□□ 0.79
CHMP2AO43633 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms