Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
UPK1AO00322 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.86■□□□□ 0.29
UPK1AO00322 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UPK1AO00322 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.85■□□□□ 0.29
UPK1AO00322 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
UPK1AO00322 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UPK1AO00322 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.85■□□□□ 0.29
UPK1AO00322 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UPK1AO00322 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.85■□□□□ 0.29
UPK1AO00322 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
UPK1AO00322 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UPK1AO00322 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UPK1AO00322 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UPK1AO00322 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UPK1AO00322 MIR662-201ENST00000384847 95 ntBASIC16.85■□□□□ 0.29
UPK1AO00322 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.85■□□□□ 0.29
UPK1AO00322 AC022616.7-201ENST00000525383 220 ntBASIC16.85■□□□□ 0.29
UPK1AO00322 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.85■□□□□ 0.29
UPK1AO00322 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.85■□□□□ 0.29
UPK1AO00322 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.85■□□□□ 0.29
UPK1AO00322 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
UPK1AO00322 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.85■□□□□ 0.29
UPK1AO00322 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UPK1AO00322 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UPK1AO00322 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UPK1AO00322 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
UPK1AO00322 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.85■□□□□ 0.29
UPK1AO00322 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UPK1AO00322 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UPK1AO00322 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.85■□□□□ 0.29
UPK1AO00322 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UPK1AO00322 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
UPK1AO00322 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UPK1AO00322 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
UPK1AO00322 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UPK1AO00322 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UPK1AO00322 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UPK1AO00322 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UPK1AO00322 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
UPK1AO00322 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UPK1AO00322 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
UPK1AO00322 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.84■□□□□ 0.29
UPK1AO00322 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UPK1AO00322 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.84■□□□□ 0.29
UPK1AO00322 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UPK1AO00322 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UPK1AO00322 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
UPK1AO00322 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UPK1AO00322 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
UPK1AO00322 AC018695.7-201ENST00000624587 2492 ntBASIC16.84■□□□□ 0.29
UPK1AO00322 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UPK1AO00322 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
UPK1AO00322 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.84■□□□□ 0.29
UPK1AO00322 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
UPK1AO00322 KRT18P21-201ENST00000515767 1272 ntBASIC16.84■□□□□ 0.29
UPK1AO00322 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.84■□□□□ 0.29
UPK1AO00322 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.84■□□□□ 0.29
UPK1AO00322 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.84■□□□□ 0.29
UPK1AO00322 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UPK1AO00322 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
UPK1AO00322 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
UPK1AO00322 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UPK1AO00322 LINC01311-201ENST00000565162 1445 ntBASIC16.84■□□□□ 0.29
UPK1AO00322 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
UPK1AO00322 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
UPK1AO00322 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
UPK1AO00322 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
UPK1AO00322 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.84■□□□□ 0.29
UPK1AO00322 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
UPK1AO00322 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
UPK1AO00322 AC100803.2-201ENST00000562459 1963 ntBASIC16.84■□□□□ 0.29
UPK1AO00322 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.84■□□□□ 0.29
UPK1AO00322 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.84■□□□□ 0.29
UPK1AO00322 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UPK1AO00322 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
UPK1AO00322 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
UPK1AO00322 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
UPK1AO00322 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UPK1AO00322 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UPK1AO00322 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
UPK1AO00322 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UPK1AO00322 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
UPK1AO00322 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
UPK1AO00322 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.83■□□□□ 0.28
UPK1AO00322 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
UPK1AO00322 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.83■□□□□ 0.28
UPK1AO00322 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
UPK1AO00322 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.83■□□□□ 0.28
UPK1AO00322 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.83■□□□□ 0.28
UPK1AO00322 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
UPK1AO00322 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.83■□□□□ 0.28
UPK1AO00322 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.83■□□□□ 0.28
UPK1AO00322 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
UPK1AO00322 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
UPK1AO00322 AC133963.1-201ENST00000504166 1679 ntBASIC16.83■□□□□ 0.28
UPK1AO00322 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.83■□□□□ 0.28
UPK1AO00322 VENTXP5-201ENST00000523979 775 ntBASIC16.83■□□□□ 0.28
UPK1AO00322 ZNF444P1-201ENST00000559497 298 ntBASIC16.83■□□□□ 0.28
UPK1AO00322 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.83■□□□□ 0.28
UPK1AO00322 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms