Protein–RNA interactions for Protein: O00221

NFKBIE, NF-kappa-B inhibitor epsilon, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIEO00221 AL513480.1-201ENST00000451731 511 ntBASIC21.28■■□□□ 1
NFKBIEO00221 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC21.28■■□□□ 1
NFKBIEO00221 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
NFKBIEO00221 RPL28-209ENST00000560055 670 ntTSL 3 BASIC21.28■■□□□ 1
NFKBIEO00221 LINC02560-201ENST00000596379 459 ntBASIC21.28■■□□□ 1
NFKBIEO00221 CECR7-204ENST00000609932 568 ntTSL 2 BASIC21.28■■□□□ 1
NFKBIEO00221 AC008761.3-201ENST00000624803 892 ntBASIC21.28■■□□□ 1
NFKBIEO00221 HFE2-206ENST00000634927 506 ntTSL 4 BASIC21.28■■□□□ 1
NFKBIEO00221 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC21.28■■□□□ 1
NFKBIEO00221 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NFKBIEO00221 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC21.28■■□□□ 1
NFKBIEO00221 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NFKBIEO00221 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
NFKBIEO00221 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.28■■□□□ 1
NFKBIEO00221 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NFKBIEO00221 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC21.28■■□□□ 1
NFKBIEO00221 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
NFKBIEO00221 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC21.28■■□□□ 1
NFKBIEO00221 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
NFKBIEO00221 SP100-208ENST00000427101 1922 ntTSL 2 BASIC21.27■■□□□ 1
NFKBIEO00221 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC21.27■■□□□ 1
NFKBIEO00221 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NFKBIEO00221 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC21.27■■□□□ 1
NFKBIEO00221 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
NFKBIEO00221 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
NFKBIEO00221 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC21.27■■□□□ 1
NFKBIEO00221 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NFKBIEO00221 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NFKBIEO00221 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC21.27■■□□□ 1
NFKBIEO00221 AL671277.1-201ENST00000429656 993 ntBASIC21.27■■□□□ 1
NFKBIEO00221 FAM207CP-201ENST00000443486 507 ntBASIC21.27■■□□□ 1
NFKBIEO00221 KLF2P3-201ENST00000451977 1087 ntBASIC21.27■■□□□ 1
NFKBIEO00221 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC21.27■■□□□ 1
NFKBIEO00221 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC21.27■■□□□ 1
NFKBIEO00221 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC21.27■■□□□ 1
NFKBIEO00221 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NFKBIEO00221 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC21.27■■□□□ 1
NFKBIEO00221 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC21.27■■□□□ 1
NFKBIEO00221 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
NFKBIEO00221 CLDN5-201ENST00000403084 2357 ntBASIC21.27■■□□□ 1
NFKBIEO00221 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
NFKBIEO00221 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NFKBIEO00221 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC21.27■■□□□ 1
NFKBIEO00221 AL590787.1-201ENST00000568856 1315 ntBASIC21.27■□□□□ 0.99
NFKBIEO00221 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
NFKBIEO00221 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
NFKBIEO00221 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
NFKBIEO00221 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NFKBIEO00221 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NFKBIEO00221 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.26■□□□□ 0.99
NFKBIEO00221 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NFKBIEO00221 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC21.26■□□□□ 0.99
NFKBIEO00221 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
NFKBIEO00221 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NFKBIEO00221 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NFKBIEO00221 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
NFKBIEO00221 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC21.26■□□□□ 0.99
NFKBIEO00221 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC21.26■□□□□ 0.99
NFKBIEO00221 AC079140.1-201ENST00000508039 487 ntBASIC21.26■□□□□ 0.99
NFKBIEO00221 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC21.26■□□□□ 0.99
NFKBIEO00221 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC21.26■□□□□ 0.99
NFKBIEO00221 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC21.26■□□□□ 0.99
NFKBIEO00221 AP001059.3-201ENST00000619053 235 ntBASIC21.26■□□□□ 0.99
NFKBIEO00221 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NFKBIEO00221 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.26■□□□□ 0.99
NFKBIEO00221 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NFKBIEO00221 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC21.26■□□□□ 0.99
NFKBIEO00221 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NFKBIEO00221 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NFKBIEO00221 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
NFKBIEO00221 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NFKBIEO00221 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
NFKBIEO00221 FO538757.1-201ENST00000623083 1397 ntBASIC21.25■□□□□ 0.99
NFKBIEO00221 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
NFKBIEO00221 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
NFKBIEO00221 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC21.25■□□□□ 0.99
NFKBIEO00221 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
NFKBIEO00221 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
NFKBIEO00221 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
NFKBIEO00221 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC21.25■□□□□ 0.99
NFKBIEO00221 AL592309.1-201ENST00000443127 649 ntBASIC21.25■□□□□ 0.99
NFKBIEO00221 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC21.25■□□□□ 0.99
NFKBIEO00221 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC21.25■□□□□ 0.99
NFKBIEO00221 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC21.25■□□□□ 0.99
NFKBIEO00221 AL008721.1-201ENST00000609964 604 ntBASIC21.25■□□□□ 0.99
NFKBIEO00221 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC21.25■□□□□ 0.99
NFKBIEO00221 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NFKBIEO00221 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NFKBIEO00221 PTGES2-AS1-201ENST00000443493 2100 ntBASIC21.25■□□□□ 0.99
NFKBIEO00221 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NFKBIEO00221 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
NFKBIEO00221 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NFKBIEO00221 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NFKBIEO00221 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC21.24■□□□□ 0.99
NFKBIEO00221 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NFKBIEO00221 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NFKBIEO00221 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NFKBIEO00221 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
NFKBIEO00221 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NFKBIEO00221 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms