Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
AP3B1O00203 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
AP3B1O00203 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP3B1O00203 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP3B1O00203 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
AP3B1O00203 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP3B1O00203 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP3B1O00203 LINC01311-201ENST00000565162 1445 ntBASIC17.97■□□□□ 0.47
AP3B1O00203 AC097374.2-201ENST00000618617 1306 ntBASIC17.97■□□□□ 0.47
AP3B1O00203 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP3B1O00203 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.96■□□□□ 0.47
AP3B1O00203 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.96■□□□□ 0.47
AP3B1O00203 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP3B1O00203 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP3B1O00203 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP3B1O00203 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.96■□□□□ 0.47
AP3B1O00203 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP3B1O00203 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
AP3B1O00203 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP3B1O00203 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
AP3B1O00203 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP3B1O00203 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.96■□□□□ 0.47
AP3B1O00203 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.96■□□□□ 0.47
AP3B1O00203 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP3B1O00203 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.96■□□□□ 0.47
AP3B1O00203 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
AP3B1O00203 AC005104.2-201ENST00000427818 678 ntBASIC17.96■□□□□ 0.47
AP3B1O00203 AC068472.1-201ENST00000474589 881 ntBASIC17.96■□□□□ 0.47
AP3B1O00203 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.96■□□□□ 0.47
AP3B1O00203 AC005332.3-201ENST00000589904 676 ntBASIC17.96■□□□□ 0.47
AP3B1O00203 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.96■□□□□ 0.47
AP3B1O00203 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
AP3B1O00203 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
AP3B1O00203 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
AP3B1O00203 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.96■□□□□ 0.47
AP3B1O00203 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.46
AP3B1O00203 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
AP3B1O00203 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
AP3B1O00203 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.96■□□□□ 0.46
AP3B1O00203 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP3B1O00203 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP3B1O00203 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
AP3B1O00203 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
AP3B1O00203 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
AP3B1O00203 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP3B1O00203 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
AP3B1O00203 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.95■□□□□ 0.46
AP3B1O00203 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.95■□□□□ 0.46
AP3B1O00203 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP3B1O00203 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP3B1O00203 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP3B1O00203 AC096633.1-201ENST00000422446 749 ntBASIC17.95■□□□□ 0.46
AP3B1O00203 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.95■□□□□ 0.46
AP3B1O00203 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.95■□□□□ 0.46
AP3B1O00203 AL390719.2-201ENST00000606993 987 ntBASIC17.95■□□□□ 0.46
AP3B1O00203 AC006011.2-201ENST00000621313 1158 ntBASIC17.95■□□□□ 0.46
AP3B1O00203 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP3B1O00203 REXO1L11P-201ENST00000620964 1927 ntBASIC17.95■□□□□ 0.46
AP3B1O00203 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
AP3B1O00203 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
AP3B1O00203 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.95■□□□□ 0.46
AP3B1O00203 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP3B1O00203 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP3B1O00203 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
AP3B1O00203 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
AP3B1O00203 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP3B1O00203 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP3B1O00203 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
AP3B1O00203 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP3B1O00203 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP3B1O00203 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.94■□□□□ 0.46
AP3B1O00203 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
AP3B1O00203 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
AP3B1O00203 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
AP3B1O00203 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
AP3B1O00203 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
AP3B1O00203 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP3B1O00203 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP3B1O00203 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
AP3B1O00203 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP3B1O00203 KRT18P57-201ENST00000443599 1254 ntBASIC17.94■□□□□ 0.46
AP3B1O00203 KRT18P38-201ENST00000449496 1282 ntBASIC17.94■□□□□ 0.46
AP3B1O00203 AC063952.2-201ENST00000498792 1227 ntBASIC17.94■□□□□ 0.46
AP3B1O00203 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.94■□□□□ 0.46
AP3B1O00203 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
AP3B1O00203 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.94■□□□□ 0.46
AP3B1O00203 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.94■□□□□ 0.46
AP3B1O00203 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.94■□□□□ 0.46
AP3B1O00203 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.94■□□□□ 0.46
AP3B1O00203 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.94■□□□□ 0.46
AP3B1O00203 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
AP3B1O00203 HYMAI.1-201ENST00000620949 238 ntBASIC17.94■□□□□ 0.46
AP3B1O00203 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP3B1O00203 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.94■□□□□ 0.46
AP3B1O00203 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.94■□□□□ 0.46
AP3B1O00203 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP3B1O00203 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP3B1O00203 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
AP3B1O00203 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
AP3B1O00203 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms