Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.2■□□□□ 0.18
NPIPA2E9PIF3 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA2E9PIF3 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA2E9PIF3 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA2E9PIF3 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
NPIPA2E9PIF3 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
NPIPA2E9PIF3 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.19■□□□□ 0.18
NPIPA2E9PIF3 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA2E9PIF3 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.19■□□□□ 0.18
NPIPA2E9PIF3 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA2E9PIF3 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA2E9PIF3 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.19■□□□□ 0.18
NPIPA2E9PIF3 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA2E9PIF3 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA2E9PIF3 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
NPIPA2E9PIF3 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA2E9PIF3 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.19■□□□□ 0.18
NPIPA2E9PIF3 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA2E9PIF3 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
NPIPA2E9PIF3 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA2E9PIF3 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA2E9PIF3 AL354751.1-201ENST00000412768 1863 ntBASIC16.19■□□□□ 0.18
NPIPA2E9PIF3 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA2E9PIF3 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA2E9PIF3 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.19■□□□□ 0.18
NPIPA2E9PIF3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
NPIPA2E9PIF3 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA2E9PIF3 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA2E9PIF3 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA2E9PIF3 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA2E9PIF3 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA2E9PIF3 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
NPIPA2E9PIF3 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
NPIPA2E9PIF3 AC106795.1-205ENST00000512851 1056 ntBASIC16.19■□□□□ 0.18
NPIPA2E9PIF3 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.19■□□□□ 0.18
NPIPA2E9PIF3 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.19■□□□□ 0.18
NPIPA2E9PIF3 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA2E9PIF3 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.19■□□□□ 0.18
NPIPA2E9PIF3 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA2E9PIF3 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.19■□□□□ 0.18
NPIPA2E9PIF3 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.19■□□□□ 0.18
NPIPA2E9PIF3 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA2E9PIF3 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA2E9PIF3 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
NPIPA2E9PIF3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA2E9PIF3 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA2E9PIF3 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA2E9PIF3 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.19■□□□□ 0.18
NPIPA2E9PIF3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA2E9PIF3 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
NPIPA2E9PIF3 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA2E9PIF3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA2E9PIF3 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA2E9PIF3 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.18■□□□□ 0.18
NPIPA2E9PIF3 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.18■□□□□ 0.18
NPIPA2E9PIF3 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA2E9PIF3 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA2E9PIF3 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA2E9PIF3 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA2E9PIF3 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA2E9PIF3 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA2E9PIF3 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA2E9PIF3 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA2E9PIF3 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA2E9PIF3 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.18■□□□□ 0.18
NPIPA2E9PIF3 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA2E9PIF3 AL022342.1-201ENST00000400363 863 ntBASIC16.18■□□□□ 0.18
NPIPA2E9PIF3 KRT18P65-201ENST00000439811 1286 ntBASIC16.18■□□□□ 0.18
NPIPA2E9PIF3 FAM197Y8-203ENST00000450145 560 ntBASIC16.18■□□□□ 0.18
NPIPA2E9PIF3 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.18■□□□□ 0.18
NPIPA2E9PIF3 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
NPIPA2E9PIF3 AC009533.2-201ENST00000543664 586 ntBASIC16.18■□□□□ 0.18
NPIPA2E9PIF3 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
NPIPA2E9PIF3 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.18■□□□□ 0.18
NPIPA2E9PIF3 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.18■□□□□ 0.18
NPIPA2E9PIF3 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.18■□□□□ 0.18
NPIPA2E9PIF3 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.18■□□□□ 0.18
NPIPA2E9PIF3 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
NPIPA2E9PIF3 AC064862.7-201ENST00000604520 867 ntBASIC16.18■□□□□ 0.18
NPIPA2E9PIF3 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
NPIPA2E9PIF3 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA2E9PIF3 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA2E9PIF3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA2E9PIF3 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA2E9PIF3 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.18■□□□□ 0.18
NPIPA2E9PIF3 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA2E9PIF3 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
NPIPA2E9PIF3 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
NPIPA2E9PIF3 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPA2E9PIF3 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPA2E9PIF3 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPA2E9PIF3 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPA2E9PIF3 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPA2E9PIF3 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.17■□□□□ 0.18
NPIPA2E9PIF3 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPA2E9PIF3 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
NPIPA2E9PIF3 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPA2E9PIF3 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPA2E9PIF3 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPA2E9PIF3 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms