Protein–RNA interactions for Protein: A6NHL2

TUBAL3, Tubulin alpha chain-like 3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBAL3A6NHL2 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16■□□□□ 0.15
TUBAL3A6NHL2 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TUBAL3A6NHL2 AC126763.1-201ENST00000552015 2118 ntBASIC16■□□□□ 0.15
TUBAL3A6NHL2 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TUBAL3A6NHL2 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TUBAL3A6NHL2 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TUBAL3A6NHL2 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TUBAL3A6NHL2 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TUBAL3A6NHL2 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.99■□□□□ 0.15
TUBAL3A6NHL2 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.99■□□□□ 0.15
TUBAL3A6NHL2 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TUBAL3A6NHL2 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TUBAL3A6NHL2 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TUBAL3A6NHL2 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.99■□□□□ 0.15
TUBAL3A6NHL2 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TUBAL3A6NHL2 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.99■□□□□ 0.15
TUBAL3A6NHL2 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.99■□□□□ 0.15
TUBAL3A6NHL2 AL022342.1-201ENST00000400363 863 ntBASIC15.99■□□□□ 0.15
TUBAL3A6NHL2 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TUBAL3A6NHL2 AP000347.1-202ENST00000435868 847 ntBASIC15.99■□□□□ 0.15
TUBAL3A6NHL2 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.99■□□□□ 0.15
TUBAL3A6NHL2 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.99■□□□□ 0.15
TUBAL3A6NHL2 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TUBAL3A6NHL2 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.99■□□□□ 0.15
TUBAL3A6NHL2 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.99■□□□□ 0.15
TUBAL3A6NHL2 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.99■□□□□ 0.15
TUBAL3A6NHL2 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TUBAL3A6NHL2 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.99■□□□□ 0.15
TUBAL3A6NHL2 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.99■□□□□ 0.15
TUBAL3A6NHL2 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TUBAL3A6NHL2 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
TUBAL3A6NHL2 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TUBAL3A6NHL2 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TUBAL3A6NHL2 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TUBAL3A6NHL2 NSUN5P1-202ENST00000421140 1535 ntBASIC15.99■□□□□ 0.15
TUBAL3A6NHL2 NSUN5P2-203ENST00000457352 1529 ntBASIC15.99■□□□□ 0.15
TUBAL3A6NHL2 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TUBAL3A6NHL2 AL357033.4-201ENST00000617703 1807 ntBASIC15.98■□□□□ 0.15
TUBAL3A6NHL2 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.98■□□□□ 0.15
TUBAL3A6NHL2 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TUBAL3A6NHL2 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC15.98■□□□□ 0.15
TUBAL3A6NHL2 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TUBAL3A6NHL2 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.98■□□□□ 0.15
TUBAL3A6NHL2 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TUBAL3A6NHL2 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
TUBAL3A6NHL2 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TUBAL3A6NHL2 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC15.98■□□□□ 0.15
TUBAL3A6NHL2 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TUBAL3A6NHL2 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TUBAL3A6NHL2 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TUBAL3A6NHL2 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TUBAL3A6NHL2 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TUBAL3A6NHL2 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TUBAL3A6NHL2 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TUBAL3A6NHL2 AP000593.1-201ENST00000393668 712 ntBASIC15.98■□□□□ 0.15
TUBAL3A6NHL2 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TUBAL3A6NHL2 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TUBAL3A6NHL2 NUS1P2-201ENST00000417358 873 ntBASIC15.98■□□□□ 0.15
TUBAL3A6NHL2 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TUBAL3A6NHL2 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.98■□□□□ 0.15
TUBAL3A6NHL2 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
TUBAL3A6NHL2 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TUBAL3A6NHL2 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
TUBAL3A6NHL2 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TUBAL3A6NHL2 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
TUBAL3A6NHL2 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TUBAL3A6NHL2 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TUBAL3A6NHL2 HEIH-201ENST00000623091 1652 ntBASIC15.98■□□□□ 0.15
TUBAL3A6NHL2 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TUBAL3A6NHL2 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.98■□□□□ 0.15
TUBAL3A6NHL2 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
TUBAL3A6NHL2 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TUBAL3A6NHL2 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TUBAL3A6NHL2 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
TUBAL3A6NHL2 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.98■□□□□ 0.15
TUBAL3A6NHL2 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TUBAL3A6NHL2 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TUBAL3A6NHL2 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
TUBAL3A6NHL2 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC15.98■□□□□ 0.15
TUBAL3A6NHL2 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TUBAL3A6NHL2 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TUBAL3A6NHL2 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TUBAL3A6NHL2 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TUBAL3A6NHL2 AC012317.2-201ENST00000623305 2251 ntBASIC15.97■□□□□ 0.15
TUBAL3A6NHL2 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TUBAL3A6NHL2 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TUBAL3A6NHL2 KRT8P50-201ENST00000562022 1438 ntBASIC15.97■□□□□ 0.15
TUBAL3A6NHL2 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TUBAL3A6NHL2 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TUBAL3A6NHL2 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TUBAL3A6NHL2 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.97■□□□□ 0.15
TUBAL3A6NHL2 AC106795.1-205ENST00000512851 1056 ntBASIC15.97■□□□□ 0.15
TUBAL3A6NHL2 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.97■□□□□ 0.15
TUBAL3A6NHL2 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.97■□□□□ 0.15
TUBAL3A6NHL2 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TUBAL3A6NHL2 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.97■□□□□ 0.15
TUBAL3A6NHL2 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.97■□□□□ 0.15
TUBAL3A6NHL2 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TUBAL3A6NHL2 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
TUBAL3A6NHL2 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms