Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 AC006480.2-201ENST00000609770 1337 ntBASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 AC091917.2-201ENST00000505002 744 ntBASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 AC103834.1-201ENST00000520383 144 ntBASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 DUX4L19-201ENST00000557448 1267 ntBASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 AC243732.1-201ENST00000612648 864 ntBASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 AC011298.3-201ENST00000615796 283 ntBASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 AC112777.1-201ENST00000540175 1423 ntBASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 AC005252.3-201ENST00000623855 2258 ntBASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 TSPY9P-201ENST00000440215 945 ntBASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 TSPY11P-201ENST00000442607 1045 ntBASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 AC105233.4-201ENST00000642045 216 ntBASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 HAL-202ENST00000538703 2637 ntTSL 2 BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 GCK-209ENST00000616242 2260 ntTSL 5 BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM238LA0A1B0GVL6 AC022144.1-201ENST00000602255 1580 ntBASIC12.47□□□□□ -0.41
TMEM238LA0A1B0GVL6 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms