Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC163A0A0D9SF12 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC163A0A0D9SF12 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC163A0A0D9SF12 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC163A0A0D9SF12 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC163A0A0D9SF12 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.5■□□□□ 0.39
CCDC163A0A0D9SF12 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC163A0A0D9SF12 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.5■□□□□ 0.39
CCDC163A0A0D9SF12 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC163A0A0D9SF12 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC163A0A0D9SF12 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC163A0A0D9SF12 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC163A0A0D9SF12 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC163A0A0D9SF12 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CCDC163A0A0D9SF12 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC163A0A0D9SF12 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CCDC163A0A0D9SF12 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC163A0A0D9SF12 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC163A0A0D9SF12 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC163A0A0D9SF12 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.49■□□□□ 0.39
CCDC163A0A0D9SF12 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CCDC163A0A0D9SF12 AC004449.1-201ENST00000564240 433 ntBASIC17.49■□□□□ 0.39
CCDC163A0A0D9SF12 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.49■□□□□ 0.39
CCDC163A0A0D9SF12 STK25P1-201ENST00000585406 838 ntBASIC17.49■□□□□ 0.39
CCDC163A0A0D9SF12 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.49■□□□□ 0.39
CCDC163A0A0D9SF12 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC163A0A0D9SF12 AC239800.4-201ENST00000603712 296 ntBASIC17.49■□□□□ 0.39
CCDC163A0A0D9SF12 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CCDC163A0A0D9SF12 AC091812.2-201ENST00000619081 385 ntBASIC17.49■□□□□ 0.39
CCDC163A0A0D9SF12 AC105339.1-204ENST00000636249 355 ntBASIC17.49■□□□□ 0.39
CCDC163A0A0D9SF12 AL121761.2-201ENST00000598007 1648 ntBASIC17.49■□□□□ 0.39
CCDC163A0A0D9SF12 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC163A0A0D9SF12 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC163A0A0D9SF12 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.49■□□□□ 0.39
CCDC163A0A0D9SF12 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC163A0A0D9SF12 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC163A0A0D9SF12 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CCDC163A0A0D9SF12 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC163A0A0D9SF12 AC005082.1-201ENST00000413042 2259 ntBASIC17.49■□□□□ 0.39
CCDC163A0A0D9SF12 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC163A0A0D9SF12 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC163A0A0D9SF12 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.48■□□□□ 0.39
CCDC163A0A0D9SF12 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC163A0A0D9SF12 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC163A0A0D9SF12 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC163A0A0D9SF12 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC163A0A0D9SF12 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC163A0A0D9SF12 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
CCDC163A0A0D9SF12 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC163A0A0D9SF12 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.48■□□□□ 0.39
CCDC163A0A0D9SF12 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.48■□□□□ 0.39
CCDC163A0A0D9SF12 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.48■□□□□ 0.39
CCDC163A0A0D9SF12 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.48■□□□□ 0.39
CCDC163A0A0D9SF12 STK19B-204ENST00000512515 211 ntBASIC17.48■□□□□ 0.39
CCDC163A0A0D9SF12 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
CCDC163A0A0D9SF12 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CCDC163A0A0D9SF12 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC163A0A0D9SF12 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.48■□□□□ 0.39
CCDC163A0A0D9SF12 REXO1L3P-201ENST00000622202 1288 ntBASIC17.48■□□□□ 0.39
CCDC163A0A0D9SF12 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC163A0A0D9SF12 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC163A0A0D9SF12 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC163A0A0D9SF12 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CCDC163A0A0D9SF12 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC163A0A0D9SF12 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC163A0A0D9SF12 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC163A0A0D9SF12 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC163A0A0D9SF12 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC163A0A0D9SF12 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CCDC163A0A0D9SF12 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC163A0A0D9SF12 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CCDC163A0A0D9SF12 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC163A0A0D9SF12 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC163A0A0D9SF12 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CCDC163A0A0D9SF12 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC163A0A0D9SF12 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC163A0A0D9SF12 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.47■□□□□ 0.39
CCDC163A0A0D9SF12 AC004461.1-201ENST00000412461 403 ntBASIC17.47■□□□□ 0.39
CCDC163A0A0D9SF12 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CCDC163A0A0D9SF12 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.47■□□□□ 0.39
CCDC163A0A0D9SF12 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC163A0A0D9SF12 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC163A0A0D9SF12 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC163A0A0D9SF12 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.47■□□□□ 0.39
CCDC163A0A0D9SF12 AC116407.2-201ENST00000613639 860 ntBASIC17.47■□□□□ 0.39
CCDC163A0A0D9SF12 AC092902.6-201ENST00000641783 218 ntBASIC17.47■□□□□ 0.39
CCDC163A0A0D9SF12 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC163A0A0D9SF12 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC163A0A0D9SF12 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CCDC163A0A0D9SF12 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC163A0A0D9SF12 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CCDC163A0A0D9SF12 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
CCDC163A0A0D9SF12 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC163A0A0D9SF12 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
CCDC163A0A0D9SF12 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC163A0A0D9SF12 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC163A0A0D9SF12 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC163A0A0D9SF12 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CCDC163A0A0D9SF12 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC163A0A0D9SF12 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms