Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
TRAV9-2A0A087WT02 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC13.3□□□□□ -0.28
TRAV9-2A0A087WT02 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV9-2A0A087WT02 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV9-2A0A087WT02 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV9-2A0A087WT02 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV9-2A0A087WT02 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV9-2A0A087WT02 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV9-2A0A087WT02 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV9-2A0A087WT02 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV9-2A0A087WT02 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
TRAV9-2A0A087WT02 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
TRAV9-2A0A087WT02 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV9-2A0A087WT02 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV9-2A0A087WT02 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV9-2A0A087WT02 TK2-204ENST00000525974 1178 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAV9-2A0A087WT02 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC13.3□□□□□ -0.28
TRAV9-2A0A087WT02 MIR4785-201ENST00000585005 73 ntBASIC13.3□□□□□ -0.28
TRAV9-2A0A087WT02 RPS15-203ENST00000586096 570 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAV9-2A0A087WT02 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC13.3□□□□□ -0.28
TRAV9-2A0A087WT02 AC073195.1-201ENST00000607241 877 ntBASIC13.3□□□□□ -0.28
TRAV9-2A0A087WT02 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAV9-2A0A087WT02 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAV9-2A0A087WT02 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV9-2A0A087WT02 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV9-2A0A087WT02 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV9-2A0A087WT02 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV9-2A0A087WT02 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV9-2A0A087WT02 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV9-2A0A087WT02 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV9-2A0A087WT02 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
TRAV9-2A0A087WT02 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV9-2A0A087WT02 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV9-2A0A087WT02 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV9-2A0A087WT02 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
TRAV9-2A0A087WT02 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV9-2A0A087WT02 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV9-2A0A087WT02 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV9-2A0A087WT02 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV9-2A0A087WT02 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
TRAV9-2A0A087WT02 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV9-2A0A087WT02 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV9-2A0A087WT02 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
TRAV9-2A0A087WT02 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV9-2A0A087WT02 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV9-2A0A087WT02 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 GOLGA6L3-201ENST00000507199 1679 ntBASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 AL355355.2-201ENST00000442321 338 ntBASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 KSR1P1-201ENST00000446298 240 ntBASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 AL353708.3-201ENST00000610272 989 ntBASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 AL049637.2-201ENST00000641778 930 ntBASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 POR-209ENST00000439269 1858 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 AC023824.1-201ENST00000562945 2975 ntBASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV9-2A0A087WT02 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms