Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA11Q9Y5H2 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA11Q9Y5H2 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
PCDHGA11Q9Y5H2 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA11Q9Y5H2 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA11Q9Y5H2 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA11Q9Y5H2 AL359075.1-203ENST00000462729 1002 ntBASIC17.29■□□□□ 0.36
PCDHGA11Q9Y5H2 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA11Q9Y5H2 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHGA11Q9Y5H2 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
PCDHGA11Q9Y5H2 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHGA11Q9Y5H2 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA11Q9Y5H2 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA11Q9Y5H2 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA11Q9Y5H2 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA11Q9Y5H2 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHGA11Q9Y5H2 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA11Q9Y5H2 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA11Q9Y5H2 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PCDHGA11Q9Y5H2 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PCDHGA11Q9Y5H2 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA11Q9Y5H2 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHGA11Q9Y5H2 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA11Q9Y5H2 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA11Q9Y5H2 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA11Q9Y5H2 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA11Q9Y5H2 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA11Q9Y5H2 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA11Q9Y5H2 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHGA11Q9Y5H2 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA11Q9Y5H2 AC108860.2-201ENST00000562760 2183 ntBASIC17.28■□□□□ 0.36
PCDHGA11Q9Y5H2 HBZP1-201ENST00000354915 429 ntBASIC17.28■□□□□ 0.36
PCDHGA11Q9Y5H2 MIR662-201ENST00000384847 95 ntBASIC17.28■□□□□ 0.36
PCDHGA11Q9Y5H2 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA11Q9Y5H2 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDHGA11Q9Y5H2 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.28■□□□□ 0.36
PCDHGA11Q9Y5H2 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.28■□□□□ 0.36
PCDHGA11Q9Y5H2 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHGA11Q9Y5H2 AC112907.2-201ENST00000448639 330 ntBASIC17.28■□□□□ 0.36
PCDHGA11Q9Y5H2 AC104076.2-201ENST00000448912 469 ntBASIC17.28■□□□□ 0.36
PCDHGA11Q9Y5H2 KRT18P38-201ENST00000449496 1282 ntBASIC17.28■□□□□ 0.36
PCDHGA11Q9Y5H2 AP003733.1-201ENST00000491725 852 ntBASIC17.28■□□□□ 0.36
PCDHGA11Q9Y5H2 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDHGA11Q9Y5H2 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.28■□□□□ 0.36
PCDHGA11Q9Y5H2 LINC01238-205ENST00000567549 1107 ntBASIC17.28■□□□□ 0.36
PCDHGA11Q9Y5H2 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDHGA11Q9Y5H2 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA11Q9Y5H2 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHGA11Q9Y5H2 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA11Q9Y5H2 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PCDHGA11Q9Y5H2 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA11Q9Y5H2 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.28■□□□□ 0.36
PCDHGA11Q9Y5H2 AC124067.4-201ENST00000519691 2379 ntBASIC17.28■□□□□ 0.36
PCDHGA11Q9Y5H2 AC100803.2-201ENST00000562459 1963 ntBASIC17.28■□□□□ 0.36
PCDHGA11Q9Y5H2 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
PCDHGA11Q9Y5H2 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA11Q9Y5H2 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDHGA11Q9Y5H2 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGA11Q9Y5H2 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGA11Q9Y5H2 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.27■□□□□ 0.36
PCDHGA11Q9Y5H2 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.27■□□□□ 0.36
PCDHGA11Q9Y5H2 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDHGA11Q9Y5H2 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGA11Q9Y5H2 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.27■□□□□ 0.36
PCDHGA11Q9Y5H2 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGA11Q9Y5H2 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGA11Q9Y5H2 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGA11Q9Y5H2 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.27■□□□□ 0.36
PCDHGA11Q9Y5H2 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.27■□□□□ 0.36
PCDHGA11Q9Y5H2 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.27■□□□□ 0.36
PCDHGA11Q9Y5H2 AC063952.2-201ENST00000498792 1227 ntBASIC17.27■□□□□ 0.36
PCDHGA11Q9Y5H2 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.27■□□□□ 0.36
PCDHGA11Q9Y5H2 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGA11Q9Y5H2 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDHGA11Q9Y5H2 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.27■□□□□ 0.36
PCDHGA11Q9Y5H2 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGA11Q9Y5H2 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.27■□□□□ 0.36
PCDHGA11Q9Y5H2 AC004263.2-201ENST00000617183 678 ntBASIC17.27■□□□□ 0.36
PCDHGA11Q9Y5H2 AC009154.2-201ENST00000621177 724 ntBASIC17.27■□□□□ 0.36
PCDHGA11Q9Y5H2 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PCDHGA11Q9Y5H2 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
PCDHGA11Q9Y5H2 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGA11Q9Y5H2 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
PCDHGA11Q9Y5H2 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGA11Q9Y5H2 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.27■□□□□ 0.35
PCDHGA11Q9Y5H2 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.27■□□□□ 0.35
PCDHGA11Q9Y5H2 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
PCDHGA11Q9Y5H2 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGA11Q9Y5H2 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.27■□□□□ 0.35
PCDHGA11Q9Y5H2 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGA11Q9Y5H2 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA11Q9Y5H2 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA11Q9Y5H2 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA11Q9Y5H2 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA11Q9Y5H2 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA11Q9Y5H2 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA11Q9Y5H2 IGHGP-201ENST00000390555 1178 ntBASIC17.26■□□□□ 0.35
PCDHGA11Q9Y5H2 TSPY12P-201ENST00000421279 868 ntBASIC17.26■□□□□ 0.35
PCDHGA11Q9Y5H2 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.26■□□□□ 0.35
PCDHGA11Q9Y5H2 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms