Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC22.29■■□□□ 1.16
RTCBQ9Y3I0 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RTCBQ9Y3I0 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC22.29■■□□□ 1.16
RTCBQ9Y3I0 REM2-202ENST00000536884 1331 ntTSL 2 BASIC22.29■■□□□ 1.16
RTCBQ9Y3I0 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC22.29■■□□□ 1.16
RTCBQ9Y3I0 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
RTCBQ9Y3I0 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RTCBQ9Y3I0 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RTCBQ9Y3I0 AC116562.4-201ENST00000641316 2276 ntBASIC22.28■■□□□ 1.16
RTCBQ9Y3I0 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC22.28■■□□□ 1.16
RTCBQ9Y3I0 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RTCBQ9Y3I0 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC22.28■■□□□ 1.16
RTCBQ9Y3I0 CD99-202ENST00000381180 530 ntTSL 2 BASIC22.28■■□□□ 1.16
RTCBQ9Y3I0 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RTCBQ9Y3I0 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC22.28■■□□□ 1.16
RTCBQ9Y3I0 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RTCBQ9Y3I0 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RTCBQ9Y3I0 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC22.28■■□□□ 1.16
RTCBQ9Y3I0 AC105339.1-204ENST00000636249 355 ntBASIC22.28■■□□□ 1.16
RTCBQ9Y3I0 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RTCBQ9Y3I0 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RTCBQ9Y3I0 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC22.28■■□□□ 1.16
RTCBQ9Y3I0 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
RTCBQ9Y3I0 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RTCBQ9Y3I0 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RTCBQ9Y3I0 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
RTCBQ9Y3I0 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC22.28■■□□□ 1.16
RTCBQ9Y3I0 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RTCBQ9Y3I0 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RTCBQ9Y3I0 PC-208ENST00000529047 1607 ntTSL 3 BASIC22.28■■□□□ 1.16
RTCBQ9Y3I0 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
RTCBQ9Y3I0 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RTCBQ9Y3I0 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RTCBQ9Y3I0 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RTCBQ9Y3I0 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RTCBQ9Y3I0 AC073130.3-201ENST00000624389 2278 ntBASIC22.27■■□□□ 1.16
RTCBQ9Y3I0 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
RTCBQ9Y3I0 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RTCBQ9Y3I0 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC22.27■■□□□ 1.16
RTCBQ9Y3I0 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RTCBQ9Y3I0 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC22.27■■□□□ 1.16
RTCBQ9Y3I0 HLA-J-203ENST00000494367 1087 ntBASIC22.27■■□□□ 1.16
RTCBQ9Y3I0 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC22.27■■□□□ 1.16
RTCBQ9Y3I0 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RTCBQ9Y3I0 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RTCBQ9Y3I0 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC22.27■■□□□ 1.16
RTCBQ9Y3I0 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RTCBQ9Y3I0 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
RTCBQ9Y3I0 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC22.27■■□□□ 1.16
RTCBQ9Y3I0 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
RTCBQ9Y3I0 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
RTCBQ9Y3I0 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
RTCBQ9Y3I0 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RTCBQ9Y3I0 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC22.26■■□□□ 1.15
RTCBQ9Y3I0 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RTCBQ9Y3I0 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
RTCBQ9Y3I0 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RTCBQ9Y3I0 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RTCBQ9Y3I0 LINC00982-205ENST00000420957 435 ntBASIC22.26■■□□□ 1.15
RTCBQ9Y3I0 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC22.26■■□□□ 1.15
RTCBQ9Y3I0 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RTCBQ9Y3I0 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC22.26■■□□□ 1.15
RTCBQ9Y3I0 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC22.26■■□□□ 1.15
RTCBQ9Y3I0 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC22.26■■□□□ 1.15
RTCBQ9Y3I0 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC22.26■■□□□ 1.15
RTCBQ9Y3I0 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC22.26■■□□□ 1.15
RTCBQ9Y3I0 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC22.26■■□□□ 1.15
RTCBQ9Y3I0 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RTCBQ9Y3I0 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RTCBQ9Y3I0 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC22.25■■□□□ 1.15
RTCBQ9Y3I0 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RTCBQ9Y3I0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RTCBQ9Y3I0 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RTCBQ9Y3I0 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RTCBQ9Y3I0 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RTCBQ9Y3I0 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
RTCBQ9Y3I0 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
RTCBQ9Y3I0 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC22.25■■□□□ 1.15
RTCBQ9Y3I0 PTMS-202ENST00000389462 773 ntTSL 2 BASIC22.25■■□□□ 1.15
RTCBQ9Y3I0 DAD1-205ENST00000543337 501 ntTSL 3 BASIC22.25■■□□□ 1.15
RTCBQ9Y3I0 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RTCBQ9Y3I0 AC025678.2-201ENST00000562061 970 ntBASIC22.25■■□□□ 1.15
RTCBQ9Y3I0 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC22.25■■□□□ 1.15
RTCBQ9Y3I0 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC22.25■■□□□ 1.15
RTCBQ9Y3I0 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RTCBQ9Y3I0 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC22.25■■□□□ 1.15
RTCBQ9Y3I0 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
RTCBQ9Y3I0 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RTCBQ9Y3I0 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RTCBQ9Y3I0 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC22.25■■□□□ 1.15
RTCBQ9Y3I0 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC22.25■■□□□ 1.15
RTCBQ9Y3I0 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RTCBQ9Y3I0 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RTCBQ9Y3I0 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC22.24■■□□□ 1.15
RTCBQ9Y3I0 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RTCBQ9Y3I0 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC22.24■■□□□ 1.15
RTCBQ9Y3I0 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RTCBQ9Y3I0 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RTCBQ9Y3I0 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
RTCBQ9Y3I0 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms