Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.58□□□□□ -0.08
RCL1Q9Y2P8 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RCL1Q9Y2P8 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
RCL1Q9Y2P8 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
RCL1Q9Y2P8 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC14.58□□□□□ -0.08
RCL1Q9Y2P8 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RCL1Q9Y2P8 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
RCL1Q9Y2P8 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.58□□□□□ -0.08
RCL1Q9Y2P8 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC14.58□□□□□ -0.08
RCL1Q9Y2P8 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RCL1Q9Y2P8 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.58□□□□□ -0.08
RCL1Q9Y2P8 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RCL1Q9Y2P8 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.57□□□□□ -0.08
RCL1Q9Y2P8 TPR-209ENST00000613151 2478 ntTSL 5 BASIC14.57□□□□□ -0.08
RCL1Q9Y2P8 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RCL1Q9Y2P8 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RCL1Q9Y2P8 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RCL1Q9Y2P8 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
RCL1Q9Y2P8 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RCL1Q9Y2P8 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RCL1Q9Y2P8 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.57□□□□□ -0.08
RCL1Q9Y2P8 AC036111.1-201ENST00000533973 1582 ntBASIC14.57□□□□□ -0.08
RCL1Q9Y2P8 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RCL1Q9Y2P8 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RCL1Q9Y2P8 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RCL1Q9Y2P8 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
RCL1Q9Y2P8 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
RCL1Q9Y2P8 AC239809.2-201ENST00000415381 517 ntBASIC14.57□□□□□ -0.08
RCL1Q9Y2P8 FAM207BP-201ENST00000447172 505 ntBASIC14.57□□□□□ -0.08
RCL1Q9Y2P8 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
RCL1Q9Y2P8 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC14.57□□□□□ -0.08
RCL1Q9Y2P8 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC14.57□□□□□ -0.08
RCL1Q9Y2P8 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC14.57□□□□□ -0.08
RCL1Q9Y2P8 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RCL1Q9Y2P8 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC14.57□□□□□ -0.08
RCL1Q9Y2P8 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RCL1Q9Y2P8 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RCL1Q9Y2P8 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RCL1Q9Y2P8 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RCL1Q9Y2P8 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RCL1Q9Y2P8 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.57□□□□□ -0.08
RCL1Q9Y2P8 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC14.57□□□□□ -0.08
RCL1Q9Y2P8 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RCL1Q9Y2P8 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RCL1Q9Y2P8 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.57□□□□□ -0.08
RCL1Q9Y2P8 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RCL1Q9Y2P8 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RCL1Q9Y2P8 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RCL1Q9Y2P8 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RCL1Q9Y2P8 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RCL1Q9Y2P8 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC14.56□□□□□ -0.08
RCL1Q9Y2P8 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.56□□□□□ -0.08
RCL1Q9Y2P8 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RCL1Q9Y2P8 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
RCL1Q9Y2P8 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RCL1Q9Y2P8 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
RCL1Q9Y2P8 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.56□□□□□ -0.08
RCL1Q9Y2P8 DOC2GP-204ENST00000639052 2548 ntBASIC14.56□□□□□ -0.08
RCL1Q9Y2P8 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RCL1Q9Y2P8 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RCL1Q9Y2P8 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RCL1Q9Y2P8 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
RCL1Q9Y2P8 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RCL1Q9Y2P8 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RCL1Q9Y2P8 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
RCL1Q9Y2P8 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC14.56□□□□□ -0.08
RCL1Q9Y2P8 RPS2P4-201ENST00000476944 856 ntBASIC14.56□□□□□ -0.08
RCL1Q9Y2P8 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC14.56□□□□□ -0.08
RCL1Q9Y2P8 DLX3-202ENST00000512495 834 ntTSL 2 BASIC14.56□□□□□ -0.08
RCL1Q9Y2P8 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RCL1Q9Y2P8 DUTP2-201ENST00000519164 463 ntBASIC14.56□□□□□ -0.08
RCL1Q9Y2P8 AC026271.3-201ENST00000571884 352 ntBASIC14.56□□□□□ -0.08
RCL1Q9Y2P8 AC233263.1-201ENST00000578059 224 ntBASIC14.56□□□□□ -0.08
RCL1Q9Y2P8 NAT14-202ENST00000587400 416 ntTSL 5 BASIC14.56□□□□□ -0.08
RCL1Q9Y2P8 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RCL1Q9Y2P8 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC14.56□□□□□ -0.08
RCL1Q9Y2P8 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RCL1Q9Y2P8 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RCL1Q9Y2P8 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RCL1Q9Y2P8 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RCL1Q9Y2P8 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.56□□□□□ -0.08
RCL1Q9Y2P8 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
RCL1Q9Y2P8 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RCL1Q9Y2P8 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RCL1Q9Y2P8 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC14.55□□□□□ -0.08
RCL1Q9Y2P8 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC14.55□□□□□ -0.08
RCL1Q9Y2P8 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RCL1Q9Y2P8 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
RCL1Q9Y2P8 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RCL1Q9Y2P8 AL391005.1-201ENST00000623953 2435 ntBASIC14.55□□□□□ -0.08
RCL1Q9Y2P8 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RCL1Q9Y2P8 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RCL1Q9Y2P8 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.55□□□□□ -0.08
RCL1Q9Y2P8 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RCL1Q9Y2P8 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RCL1Q9Y2P8 AL024508.2-201ENST00000607749 1894 ntBASIC14.55□□□□□ -0.08
RCL1Q9Y2P8 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RCL1Q9Y2P8 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RCL1Q9Y2P8 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RCL1Q9Y2P8 PKD1P5-201ENST00000532415 10291 ntBASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms