Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PCDHA4Q9UN74 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHA4Q9UN74 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDHA4Q9UN74 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHA4Q9UN74 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHA4Q9UN74 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.31■□□□□ 0.84
PCDHA4Q9UN74 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHA4Q9UN74 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHA4Q9UN74 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHA4Q9UN74 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDHA4Q9UN74 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHA4Q9UN74 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHA4Q9UN74 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.31■□□□□ 0.84
PCDHA4Q9UN74 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHA4Q9UN74 AC099336.1-202ENST00000602961 463 ntBASIC20.31■□□□□ 0.84
PCDHA4Q9UN74 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
PCDHA4Q9UN74 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHA4Q9UN74 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHA4Q9UN74 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
PCDHA4Q9UN74 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PCDHA4Q9UN74 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.31■□□□□ 0.84
PCDHA4Q9UN74 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
PCDHA4Q9UN74 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHA4Q9UN74 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.3■□□□□ 0.84
PCDHA4Q9UN74 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHA4Q9UN74 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHA4Q9UN74 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHA4Q9UN74 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHA4Q9UN74 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHA4Q9UN74 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
PCDHA4Q9UN74 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHA4Q9UN74 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHA4Q9UN74 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHA4Q9UN74 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHA4Q9UN74 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHA4Q9UN74 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHA4Q9UN74 FAM220CP-201ENST00000395253 831 ntBASIC20.3■□□□□ 0.84
PCDHA4Q9UN74 POM121L3P-201ENST00000419331 1163 ntBASIC20.3■□□□□ 0.84
PCDHA4Q9UN74 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PCDHA4Q9UN74 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.3■□□□□ 0.84
PCDHA4Q9UN74 AC122714.2-201ENST00000502787 707 ntBASIC20.3■□□□□ 0.84
PCDHA4Q9UN74 AC096582.2-201ENST00000510860 516 ntBASIC20.3■□□□□ 0.84
PCDHA4Q9UN74 MIR3652-201ENST00000579335 131 ntBASIC20.3■□□□□ 0.84
PCDHA4Q9UN74 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHA4Q9UN74 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
PCDHA4Q9UN74 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHA4Q9UN74 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHA4Q9UN74 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHA4Q9UN74 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PCDHA4Q9UN74 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
PCDHA4Q9UN74 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PCDHA4Q9UN74 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHA4Q9UN74 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHA4Q9UN74 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHA4Q9UN74 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHA4Q9UN74 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDHA4Q9UN74 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHA4Q9UN74 AC005104.2-201ENST00000427818 678 ntBASIC20.29■□□□□ 0.84
PCDHA4Q9UN74 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PCDHA4Q9UN74 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDHA4Q9UN74 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
PCDHA4Q9UN74 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.29■□□□□ 0.84
PCDHA4Q9UN74 LINC01451-201ENST00000623792 534 ntBASIC20.29■□□□□ 0.84
PCDHA4Q9UN74 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDHA4Q9UN74 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDHA4Q9UN74 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHA4Q9UN74 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHA4Q9UN74 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHA4Q9UN74 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHA4Q9UN74 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHA4Q9UN74 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHA4Q9UN74 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
PCDHA4Q9UN74 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHA4Q9UN74 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDHA4Q9UN74 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHA4Q9UN74 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHA4Q9UN74 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHA4Q9UN74 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHA4Q9UN74 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHA4Q9UN74 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHA4Q9UN74 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDHA4Q9UN74 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PCDHA4Q9UN74 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHA4Q9UN74 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.28■□□□□ 0.84
PCDHA4Q9UN74 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDHA4Q9UN74 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
PCDHA4Q9UN74 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHA4Q9UN74 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHA4Q9UN74 RCN1P2-201ENST00000398357 915 ntBASIC20.28■□□□□ 0.84
PCDHA4Q9UN74 NUS1P1-201ENST00000446295 882 ntBASIC20.28■□□□□ 0.84
PCDHA4Q9UN74 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PCDHA4Q9UN74 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.28■□□□□ 0.84
PCDHA4Q9UN74 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHA4Q9UN74 AC114341.1-201ENST00000618070 349 ntBASIC20.28■□□□□ 0.84
PCDHA4Q9UN74 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHA4Q9UN74 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
PCDHA4Q9UN74 AC133963.1-201ENST00000504166 1679 ntBASIC20.28■□□□□ 0.84
PCDHA4Q9UN74 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDHA4Q9UN74 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.28■□□□□ 0.84
PCDHA4Q9UN74 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms