Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 TP73-AS1-210ENST00000637775 1455 ntBASIC13.75□□□□□ -0.21
NOTCH3Q9UM47 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NOTCH3Q9UM47 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NOTCH3Q9UM47 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
NOTCH3Q9UM47 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
NOTCH3Q9UM47 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC13.75□□□□□ -0.21
NOTCH3Q9UM47 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NOTCH3Q9UM47 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NOTCH3Q9UM47 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NOTCH3Q9UM47 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
NOTCH3Q9UM47 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
NOTCH3Q9UM47 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
NOTCH3Q9UM47 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NOTCH3Q9UM47 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NOTCH3Q9UM47 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
NOTCH3Q9UM47 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
NOTCH3Q9UM47 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NOTCH3Q9UM47 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NOTCH3Q9UM47 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC13.75□□□□□ -0.21
NOTCH3Q9UM47 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.75□□□□□ -0.21
NOTCH3Q9UM47 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC13.75□□□□□ -0.21
NOTCH3Q9UM47 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC13.75□□□□□ -0.21
NOTCH3Q9UM47 AC008735.5-201ENST00000623544 497 ntBASIC13.75□□□□□ -0.21
NOTCH3Q9UM47 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
NOTCH3Q9UM47 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NOTCH3Q9UM47 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NOTCH3Q9UM47 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
NOTCH3Q9UM47 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.75□□□□□ -0.21
NOTCH3Q9UM47 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
NOTCH3Q9UM47 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC13.75□□□□□ -0.21
NOTCH3Q9UM47 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
NOTCH3Q9UM47 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NOTCH3Q9UM47 AL161772.1-201ENST00000610494 4412 ntBASIC13.75□□□□□ -0.21
NOTCH3Q9UM47 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC13.75□□□□□ -0.21
NOTCH3Q9UM47 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC13.74□□□□□ -0.21
NOTCH3Q9UM47 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NOTCH3Q9UM47 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NOTCH3Q9UM47 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
NOTCH3Q9UM47 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC13.74□□□□□ -0.21
NOTCH3Q9UM47 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.74□□□□□ -0.21
NOTCH3Q9UM47 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC13.74□□□□□ -0.21
NOTCH3Q9UM47 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC13.74□□□□□ -0.21
NOTCH3Q9UM47 AL049840.3-201ENST00000602669 611 ntBASIC13.74□□□□□ -0.21
NOTCH3Q9UM47 FAM215A-202ENST00000632077 792 ntBASIC13.74□□□□□ -0.21
NOTCH3Q9UM47 ADM-207ENST00000530439 1839 ntTSL 2 BASIC13.74□□□□□ -0.21
NOTCH3Q9UM47 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
NOTCH3Q9UM47 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NOTCH3Q9UM47 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
NOTCH3Q9UM47 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
NOTCH3Q9UM47 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NOTCH3Q9UM47 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC13.74□□□□□ -0.21
NOTCH3Q9UM47 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC13.74□□□□□ -0.21
NOTCH3Q9UM47 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
NOTCH3Q9UM47 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
NOTCH3Q9UM47 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC13.74□□□□□ -0.21
NOTCH3Q9UM47 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NOTCH3Q9UM47 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NOTCH3Q9UM47 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC13.74□□□□□ -0.21
NOTCH3Q9UM47 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NOTCH3Q9UM47 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC13.74□□□□□ -0.21
NOTCH3Q9UM47 AC106730.1-201ENST00000566722 1090 ntBASIC13.74□□□□□ -0.21
NOTCH3Q9UM47 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC13.74□□□□□ -0.21
NOTCH3Q9UM47 LINC02084-201ENST00000606069 1096 ntBASIC13.74□□□□□ -0.21
NOTCH3Q9UM47 AC004408.2-201ENST00000623613 2777 ntBASIC13.74□□□□□ -0.21
NOTCH3Q9UM47 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
NOTCH3Q9UM47 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NOTCH3Q9UM47 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC13.74□□□□□ -0.21
NOTCH3Q9UM47 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NOTCH3Q9UM47 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NOTCH3Q9UM47 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NOTCH3Q9UM47 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NOTCH3Q9UM47 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
NOTCH3Q9UM47 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
NOTCH3Q9UM47 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC13.74□□□□□ -0.21
NOTCH3Q9UM47 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NOTCH3Q9UM47 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NOTCH3Q9UM47 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
NOTCH3Q9UM47 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NOTCH3Q9UM47 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NOTCH3Q9UM47 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NOTCH3Q9UM47 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NOTCH3Q9UM47 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NOTCH3Q9UM47 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NOTCH3Q9UM47 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NOTCH3Q9UM47 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NOTCH3Q9UM47 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NOTCH3Q9UM47 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC13.73□□□□□ -0.21
NOTCH3Q9UM47 AC211486.1-202ENST00000416371 468 ntBASIC13.73□□□□□ -0.21
NOTCH3Q9UM47 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.73□□□□□ -0.21
NOTCH3Q9UM47 AC211476.1-201ENST00000503899 468 ntBASIC13.73□□□□□ -0.21
NOTCH3Q9UM47 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC13.73□□□□□ -0.21
NOTCH3Q9UM47 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC13.73□□□□□ -0.21
NOTCH3Q9UM47 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC13.73□□□□□ -0.21
NOTCH3Q9UM47 AC116407.3-201ENST00000623905 1129 ntBASIC13.73□□□□□ -0.21
NOTCH3Q9UM47 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NOTCH3Q9UM47 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NOTCH3Q9UM47 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
NOTCH3Q9UM47 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC13.73□□□□□ -0.21
NOTCH3Q9UM47 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NOTCH3Q9UM47 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms