Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 AL049757.1-201ENST00000616842 1596 ntBASIC18.48■□□□□ 0.55
DNMT3BQ9UBC3 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
DNMT3BQ9UBC3 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.48■□□□□ 0.55
DNMT3BQ9UBC3 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.48■□□□□ 0.55
DNMT3BQ9UBC3 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
DNMT3BQ9UBC3 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
DNMT3BQ9UBC3 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
DNMT3BQ9UBC3 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.48■□□□□ 0.55
DNMT3BQ9UBC3 AL020989.1-201ENST00000422979 469 ntBASIC18.48■□□□□ 0.55
DNMT3BQ9UBC3 AC108751.1-201ENST00000490852 363 ntBASIC18.48■□□□□ 0.55
DNMT3BQ9UBC3 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.48■□□□□ 0.55
DNMT3BQ9UBC3 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.48■□□□□ 0.55
DNMT3BQ9UBC3 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.48■□□□□ 0.55
DNMT3BQ9UBC3 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.48■□□□□ 0.55
DNMT3BQ9UBC3 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.48■□□□□ 0.55
DNMT3BQ9UBC3 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.48■□□□□ 0.55
DNMT3BQ9UBC3 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.48■□□□□ 0.55
DNMT3BQ9UBC3 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.48■□□□□ 0.55
DNMT3BQ9UBC3 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.48■□□□□ 0.55
DNMT3BQ9UBC3 AC064836.3-201ENST00000607928 673 ntBASIC18.48■□□□□ 0.55
DNMT3BQ9UBC3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DNMT3BQ9UBC3 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
DNMT3BQ9UBC3 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
DNMT3BQ9UBC3 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DNMT3BQ9UBC3 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.48■□□□□ 0.55
DNMT3BQ9UBC3 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
DNMT3BQ9UBC3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
DNMT3BQ9UBC3 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DNMT3BQ9UBC3 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DNMT3BQ9UBC3 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DNMT3BQ9UBC3 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DNMT3BQ9UBC3 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.47■□□□□ 0.55
DNMT3BQ9UBC3 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DNMT3BQ9UBC3 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.47■□□□□ 0.55
DNMT3BQ9UBC3 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
DNMT3BQ9UBC3 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
DNMT3BQ9UBC3 AC132938.5-201ENST00000624980 1813 ntBASIC18.47■□□□□ 0.55
DNMT3BQ9UBC3 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.47■□□□□ 0.55
DNMT3BQ9UBC3 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
DNMT3BQ9UBC3 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.47■□□□□ 0.55
DNMT3BQ9UBC3 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
DNMT3BQ9UBC3 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
DNMT3BQ9UBC3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DNMT3BQ9UBC3 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
DNMT3BQ9UBC3 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.47■□□□□ 0.55
DNMT3BQ9UBC3 RPS8P6-201ENST00000426177 609 ntBASIC18.47■□□□□ 0.55
DNMT3BQ9UBC3 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.47■□□□□ 0.55
DNMT3BQ9UBC3 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
DNMT3BQ9UBC3 AL589182.2-201ENST00000619332 1049 ntBASIC18.47■□□□□ 0.55
DNMT3BQ9UBC3 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.47■□□□□ 0.55
DNMT3BQ9UBC3 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
DNMT3BQ9UBC3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
DNMT3BQ9UBC3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.47■□□□□ 0.55
DNMT3BQ9UBC3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
DNMT3BQ9UBC3 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DNMT3BQ9UBC3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.47■□□□□ 0.55
DNMT3BQ9UBC3 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.47■□□□□ 0.55
DNMT3BQ9UBC3 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DNMT3BQ9UBC3 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
DNMT3BQ9UBC3 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.46■□□□□ 0.55
DNMT3BQ9UBC3 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DNMT3BQ9UBC3 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
DNMT3BQ9UBC3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
DNMT3BQ9UBC3 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DNMT3BQ9UBC3 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
DNMT3BQ9UBC3 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
DNMT3BQ9UBC3 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.46■□□□□ 0.55
DNMT3BQ9UBC3 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
DNMT3BQ9UBC3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DNMT3BQ9UBC3 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
DNMT3BQ9UBC3 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DNMT3BQ9UBC3 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DNMT3BQ9UBC3 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
DNMT3BQ9UBC3 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
DNMT3BQ9UBC3 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.46■□□□□ 0.55
DNMT3BQ9UBC3 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DNMT3BQ9UBC3 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
DNMT3BQ9UBC3 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.46■□□□□ 0.55
DNMT3BQ9UBC3 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
DNMT3BQ9UBC3 KRT18P2-201ENST00000447938 1258 ntBASIC18.46■□□□□ 0.55
DNMT3BQ9UBC3 AC002347.1-201ENST00000569543 541 ntBASIC18.46■□□□□ 0.55
DNMT3BQ9UBC3 AP001160.2-201ENST00000596071 487 ntBASIC18.46■□□□□ 0.55
DNMT3BQ9UBC3 AC004706.3-202ENST00000621574 984 ntBASIC18.46■□□□□ 0.55
DNMT3BQ9UBC3 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.46■□□□□ 0.55
DNMT3BQ9UBC3 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
DNMT3BQ9UBC3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DNMT3BQ9UBC3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DNMT3BQ9UBC3 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
DNMT3BQ9UBC3 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
DNMT3BQ9UBC3 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.46■□□□□ 0.54
DNMT3BQ9UBC3 AC148477.5-201ENST00000625164 1645 ntBASIC18.45■□□□□ 0.54
DNMT3BQ9UBC3 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.45■□□□□ 0.54
DNMT3BQ9UBC3 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.45■□□□□ 0.54
DNMT3BQ9UBC3 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.45■□□□□ 0.54
DNMT3BQ9UBC3 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.45■□□□□ 0.54
DNMT3BQ9UBC3 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
DNMT3BQ9UBC3 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.45■□□□□ 0.54
DNMT3BQ9UBC3 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
DNMT3BQ9UBC3 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DNMT3BQ9UBC3 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms