Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.83■□□□□ 0.28
VAPAQ9P0L0 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VAPAQ9P0L0 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
VAPAQ9P0L0 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.83■□□□□ 0.28
VAPAQ9P0L0 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.83■□□□□ 0.28
VAPAQ9P0L0 FAM87A-204ENST00000613235 858 ntBASIC16.83■□□□□ 0.28
VAPAQ9P0L0 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VAPAQ9P0L0 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VAPAQ9P0L0 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VAPAQ9P0L0 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
VAPAQ9P0L0 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VAPAQ9P0L0 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
VAPAQ9P0L0 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.82■□□□□ 0.28
VAPAQ9P0L0 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VAPAQ9P0L0 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VAPAQ9P0L0 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
VAPAQ9P0L0 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.82■□□□□ 0.28
VAPAQ9P0L0 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
VAPAQ9P0L0 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VAPAQ9P0L0 KRT17P2-201ENST00000300992 1314 ntBASIC16.82■□□□□ 0.28
VAPAQ9P0L0 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VAPAQ9P0L0 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VAPAQ9P0L0 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VAPAQ9P0L0 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.82■□□□□ 0.28
VAPAQ9P0L0 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.82■□□□□ 0.28
VAPAQ9P0L0 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.82■□□□□ 0.28
VAPAQ9P0L0 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
VAPAQ9P0L0 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.82■□□□□ 0.28
VAPAQ9P0L0 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.82■□□□□ 0.28
VAPAQ9P0L0 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VAPAQ9P0L0 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
VAPAQ9P0L0 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VAPAQ9P0L0 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
VAPAQ9P0L0 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VAPAQ9P0L0 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VAPAQ9P0L0 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
VAPAQ9P0L0 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VAPAQ9P0L0 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
VAPAQ9P0L0 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
VAPAQ9P0L0 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.81■□□□□ 0.28
VAPAQ9P0L0 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VAPAQ9P0L0 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VAPAQ9P0L0 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.81■□□□□ 0.28
VAPAQ9P0L0 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VAPAQ9P0L0 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VAPAQ9P0L0 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VAPAQ9P0L0 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
VAPAQ9P0L0 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VAPAQ9P0L0 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
VAPAQ9P0L0 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
VAPAQ9P0L0 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
VAPAQ9P0L0 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.81■□□□□ 0.28
VAPAQ9P0L0 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VAPAQ9P0L0 KRT18P65-201ENST00000439811 1286 ntBASIC16.81■□□□□ 0.28
VAPAQ9P0L0 TSPY15P-201ENST00000457163 923 ntBASIC16.81■□□□□ 0.28
VAPAQ9P0L0 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.81■□□□□ 0.28
VAPAQ9P0L0 ECEL1P2-202ENST00000465689 757 ntBASIC16.81■□□□□ 0.28
VAPAQ9P0L0 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.81■□□□□ 0.28
VAPAQ9P0L0 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.81■□□□□ 0.28
VAPAQ9P0L0 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.81■□□□□ 0.28
VAPAQ9P0L0 AL512604.3-201ENST00000569583 964 ntBASIC16.81■□□□□ 0.28
VAPAQ9P0L0 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
VAPAQ9P0L0 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VAPAQ9P0L0 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
VAPAQ9P0L0 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VAPAQ9P0L0 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VAPAQ9P0L0 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VAPAQ9P0L0 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.81■□□□□ 0.28
VAPAQ9P0L0 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
VAPAQ9P0L0 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
VAPAQ9P0L0 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
VAPAQ9P0L0 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
VAPAQ9P0L0 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VAPAQ9P0L0 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
VAPAQ9P0L0 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
VAPAQ9P0L0 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VAPAQ9P0L0 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.81■□□□□ 0.28
VAPAQ9P0L0 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.8■□□□□ 0.28
VAPAQ9P0L0 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VAPAQ9P0L0 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.8■□□□□ 0.28
VAPAQ9P0L0 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.8■□□□□ 0.28
VAPAQ9P0L0 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VAPAQ9P0L0 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
VAPAQ9P0L0 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VAPAQ9P0L0 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VAPAQ9P0L0 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.8■□□□□ 0.28
VAPAQ9P0L0 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.8■□□□□ 0.28
VAPAQ9P0L0 HMGA1P5-201ENST00000412453 271 ntBASIC16.8■□□□□ 0.28
VAPAQ9P0L0 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.8■□□□□ 0.28
VAPAQ9P0L0 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.8■□□□□ 0.28
VAPAQ9P0L0 NAPSB-206ENST00000562112 1266 ntBASIC16.8■□□□□ 0.28
VAPAQ9P0L0 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.8■□□□□ 0.28
VAPAQ9P0L0 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.8■□□□□ 0.28
VAPAQ9P0L0 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
VAPAQ9P0L0 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
VAPAQ9P0L0 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VAPAQ9P0L0 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VAPAQ9P0L0 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VAPAQ9P0L0 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VAPAQ9P0L0 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms